Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 AC092666.1-201ENST00000492054 573 ntTSL 4 BASIC1.41□□□□□ -2.18
RPL39P62891 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC1.41□□□□□ -2.18
RPL39P62891 AC007513.1-201ENST00000548740 379 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL39P62891 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC1.41□□□□□ -2.18
RPL39P62891 PWRN1-206ENST00000565512 433 ntTSL 2 BASIC1.41□□□□□ -2.18
RPL39P62891 DNAJC19P3-201ENST00000594491 331 ntBASIC1.41□□□□□ -2.18
RPL39P62891 NRBF2P5-201ENST00000603087 788 ntBASIC1.41□□□□□ -2.18
RPL39P62891 AC007938.3-201ENST00000604965 623 ntBASIC1.41□□□□□ -2.18
RPL39P62891 MIR92B-201ENST00000607575 96 ntBASIC1.41□□□□□ -2.18
RPL39P62891 AC120053.1-201ENST00000607706 736 ntBASIC1.41□□□□□ -2.18
RPL39P62891 MIR6840-201ENST00000611937 71 ntBASIC1.41□□□□□ -2.18
RPL39P62891 AC135507.2-201ENST00000612443 309 ntBASIC1.41□□□□□ -2.18
RPL39P62891 AC010378.1-201ENST00000619270 362 ntBASIC1.41□□□□□ -2.18
RPL39P62891 OR13G1-202ENST00000642119 2568 ntAPPRIS P1 BASIC1.4□□□□□ -2.19
RPL39P62891 AC006020.1-201ENST00000420179 1854 ntBASIC1.4□□□□□ -2.19
RPL39P62891 RLIMP2-201ENST00000427891 1563 ntBASIC1.4□□□□□ -2.19
RPL39P62891 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC1.4□□□□□ -2.19
RPL39P62891 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC1.4□□□□□ -2.19
RPL39P62891 SNORA36C-201ENST00000384289 132 ntBASIC1.4□□□□□ -2.19
RPL39P62891 AL031679.1-201ENST00000400616 525 ntBASIC1.4□□□□□ -2.19
RPL39P62891 RPL23AP47-201ENST00000408017 460 ntBASIC1.4□□□□□ -2.19
RPL39P62891 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL39P62891 RNA5SP489-201ENST00000410986 109 ntBASIC1.4□□□□□ -2.19
RPL39P62891 AL139156.1-201ENST00000412785 841 ntBASIC1.4□□□□□ -2.19
RPL39P62891 AC109780.2-201ENST00000413467 845 ntBASIC1.4□□□□□ -2.19
RPL39P62891 AC012370.1-201ENST00000419244 530 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL39P62891 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC1.4□□□□□ -2.19
RPL39P62891 HIGD1AP2-201ENST00000446367 280 ntBASIC1.4□□□□□ -2.19
RPL39P62891 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC1.4□□□□□ -2.19
RPL39P62891 AC096666.1-201ENST00000454965 348 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL39P62891 HMGB3P30-201ENST00000457863 606 ntBASIC1.4□□□□□ -2.19
RPL39P62891 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL39P62891 AC126389.1-201ENST00000477436 290 ntBASIC1.4□□□□□ -2.19
RPL39P62891 HMGB3P15-201ENST00000507326 574 ntBASIC1.4□□□□□ -2.19
RPL39P62891 HMGN1P28-201ENST00000521340 364 ntBASIC1.4□□□□□ -2.19
RPL39P62891 FAM92A1P1-201ENST00000528023 890 ntBASIC1.4□□□□□ -2.19
RPL39P62891 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL39P62891 AP003049.2-202ENST00000532929 803 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL39P62891 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL39P62891 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC1.4□□□□□ -2.19
RPL39P62891 AL049838.1-201ENST00000563647 981 ntBASIC1.4□□□□□ -2.19
RPL39P62891 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC1.4□□□□□ -2.19
RPL39P62891 DUXAP4-201ENST00000603046 613 ntBASIC1.4□□□□□ -2.19
RPL39P62891 AC090425.2-201ENST00000608818 501 ntBASIC1.4□□□□□ -2.19
RPL39P62891 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC1.4□□□□□ -2.19
RPL39P62891 C8orf34-202ENST00000337103 3652 ntAPPRIS ALT2 TSL 1 (best) BASIC1.4□□□□□ -2.19
RPL39P62891 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC1.4□□□□□ -2.19
RPL39P62891 DYNC2H1-203ENST00000398093 12945 ntAPPRIS P3 TSL 5 BASIC1.4□□□□□ -2.19
RPL39P62891 AL109809.4-201ENST00000603520 2185 ntBASIC1.4□□□□□ -2.19
RPL39P62891 FAR1-204ENST00000532502 5820 ntTSL 2 BASIC1.39□□□□□ -2.19
RPL39P62891 MTND5P6-201ENST00000422338 1798 ntBASIC1.39□□□□□ -2.19
RPL39P62891 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RPL39P62891 AL136164.4-201ENST00000625013 2135 ntBASIC1.39□□□□□ -2.19
RPL39P62891 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC1.39□□□□□ -2.19
RPL39P62891 MTND4P35-201ENST00000604257 1375 ntBASIC1.39□□□□□ -2.19
RPL39P62891 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RPL39P62891 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC1.39□□□□□ -2.19
RPL39P62891 SNORA67.1-201ENST00000364749 141 ntBASIC1.39□□□□□ -2.19
RPL39P62891 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC1.39□□□□□ -2.19
RPL39P62891 AL356057.1-202ENST00000402263 756 ntBASIC1.39□□□□□ -2.19
RPL39P62891 NDUFB4P4-201ENST00000404822 243 ntBASIC1.39□□□□□ -2.19
RPL39P62891 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC1.39□□□□□ -2.19
RPL39P62891 AC019064.1-201ENST00000414796 499 ntTSL 2 BASIC1.39□□□□□ -2.19
RPL39P62891 PTP4A1P1-201ENST00000420539 515 ntBASIC1.39□□□□□ -2.19
RPL39P62891 RFESDP1-201ENST00000422350 461 ntBASIC1.39□□□□□ -2.19
RPL39P62891 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL39P62891 MYL8P-204ENST00000431574 518 ntBASIC1.39□□□□□ -2.19
RPL39P62891 CYCSP32-201ENST00000440548 321 ntBASIC1.39□□□□□ -2.19
RPL39P62891 HSFY3P-201ENST00000444242 1191 ntBASIC1.39□□□□□ -2.19
RPL39P62891 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL39P62891 AC096576.1-201ENST00000489014 359 ntBASIC1.39□□□□□ -2.19
RPL39P62891 AC012170.1-201ENST00000495139 359 ntBASIC1.39□□□□□ -2.19
RPL39P62891 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC1.39□□□□□ -2.19
RPL39P62891 AC096571.1-202ENST00000506634 735 ntBASIC1.39□□□□□ -2.19
RPL39P62891 FABP5P6-201ENST00000510588 409 ntBASIC1.39□□□□□ -2.19
RPL39P62891 AC034244.2-201ENST00000514668 858 ntBASIC1.39□□□□□ -2.19
RPL39P62891 RNU1-104P-201ENST00000517280 175 ntBASIC1.39□□□□□ -2.19
RPL39P62891 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL39P62891 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC1.39□□□□□ -2.19
RPL39P62891 AP001646.1-201ENST00000527936 915 ntBASIC1.39□□□□□ -2.19
RPL39P62891 MEG8-218ENST00000556720 456 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL39P62891 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC1.39□□□□□ -2.19
RPL39P62891 SNRPGP19-201ENST00000603826 189 ntBASIC1.39□□□□□ -2.19
RPL39P62891 Y_RNA.783-201ENST00000613546 102 ntBASIC1.39□□□□□ -2.19
RPL39P62891 ATP13A5-205ENST00000620313 709 ntTSL 5 BASIC1.39□□□□□ -2.19
RPL39P62891 AC098657.3-201ENST00000620434 263 ntBASIC1.39□□□□□ -2.19
RPL39P62891 AC025034.2-201ENST00000623264 286 ntBASIC1.39□□□□□ -2.19
RPL39P62891 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC1.39□□□□□ -2.19
RPL39P62891 SI-201ENST00000264382 6011 ntAPPRIS P1 TSL 1 (best) BASIC1.39□□□□□ -2.19
RPL39P62891 HOMER1-201ENST00000282260 774 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RPL39P62891 AL596028.1-201ENST00000326971 197 ntBASIC1.38□□□□□ -2.19
RPL39P62891 COMMD6-201ENST00000355801 486 ntTSL 2 BASIC1.38□□□□□ -2.19
RPL39P62891 SNORA80A-201ENST00000363922 136 ntBASIC1.38□□□□□ -2.19
RPL39P62891 U3.12-201ENST00000364498 214 ntBASIC1.38□□□□□ -2.19
RPL39P62891 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RPL39P62891 RPS4XP8-201ENST00000402039 771 ntBASIC1.38□□□□□ -2.19
RPL39P62891 XKRYP4-201ENST00000414395 483 ntBASIC1.38□□□□□ -2.19
RPL39P62891 AL157884.2-201ENST00000424177 551 ntTSL 3 BASIC1.38□□□□□ -2.19
RPL39P62891 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC1.38□□□□□ -2.19
RPL39P62891 PSMA2P3-201ENST00000429685 675 ntBASIC1.38□□□□□ -2.19
Retrieved 100 of 98,524 protein–RNA pairs in 115.1 ms