Protein–RNA interactions for Protein: P61011

SRP54, Signal recognition particle 54 kDa protein, humanhuman

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54P61011 RNU6-27P-201ENST00000516146 107 ntBASIC3.49□□□□□ -1.85
SRP54P61011 RN7SKP60-201ENST00000516985 239 ntBASIC3.49□□□□□ -1.85
SRP54P61011 AC024958.1-201ENST00000519364 902 ntTSL 5 BASIC3.49□□□□□ -1.85
SRP54P61011 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SRP54P61011 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.49□□□□□ -1.85
SRP54P61011 IGHV3-76-201ENST00000522465 295 ntBASIC3.49□□□□□ -1.85
SRP54P61011 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC3.49□□□□□ -1.85
SRP54P61011 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.49□□□□□ -1.85
SRP54P61011 SYF2P1-201ENST00000550658 413 ntBASIC3.49□□□□□ -1.85
SRP54P61011 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC3.49□□□□□ -1.85
SRP54P61011 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC3.49□□□□□ -1.85
SRP54P61011 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC3.49□□□□□ -1.85
SRP54P61011 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.49□□□□□ -1.85
SRP54P61011 BNIP3P24-201ENST00000593398 557 ntBASIC3.49□□□□□ -1.85
SRP54P61011 BNIP3P27-201ENST00000599991 412 ntBASIC3.49□□□□□ -1.85
SRP54P61011 AC096947.1-201ENST00000603233 470 ntBASIC3.49□□□□□ -1.85
SRP54P61011 AC010738.1-201ENST00000604970 987 ntBASIC3.49□□□□□ -1.85
SRP54P61011 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.49□□□□□ -1.85
SRP54P61011 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.49□□□□□ -1.85
SRP54P61011 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SRP54P61011 DNAH12-201ENST00000311202 1555 ntTSL 2 BASIC3.49□□□□□ -1.85
SRP54P61011 AL672296.1-201ENST00000427780 2158 ntBASIC3.49□□□□□ -1.85
SRP54P61011 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
SRP54P61011 MTND5P1-201ENST00000445440 1375 ntBASIC3.49□□□□□ -1.85
SRP54P61011 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SRP54P61011 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
SRP54P61011 ATM-203ENST00000452508 12954 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SRP54P61011 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SRP54P61011 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SRP54P61011 RABGAP1L-203ENST00000347255 1744 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SRP54P61011 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
SRP54P61011 snoZ40.1-201ENST00000364540 72 ntBASIC3.48□□□□□ -1.85
SRP54P61011 RNU6-878P-201ENST00000384578 110 ntBASIC3.48□□□□□ -1.85
SRP54P61011 ERMN-209ENST00000420719 1246 ntTSL 2 BASIC3.48□□□□□ -1.85
SRP54P61011 LINC01676-201ENST00000420901 410 ntTSL 3 BASIC3.48□□□□□ -1.85
SRP54P61011 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC3.48□□□□□ -1.85
SRP54P61011 AL845311.1-201ENST00000444791 891 ntTSL 3 BASIC3.48□□□□□ -1.85
SRP54P61011 HMGB3P6-201ENST00000444896 598 ntBASIC3.48□□□□□ -1.85
SRP54P61011 RPL26P28-201ENST00000451325 435 ntBASIC3.48□□□□□ -1.85
SRP54P61011 HMGB1P15-201ENST00000453854 435 ntBASIC3.48□□□□□ -1.85
SRP54P61011 U3.44-201ENST00000458938 192 ntBASIC3.48□□□□□ -1.85
SRP54P61011 TIPARP-AS1-201ENST00000463449 735 ntTSL 3 BASIC3.48□□□□□ -1.85
SRP54P61011 RPL21P10-201ENST00000463521 490 ntBASIC3.48□□□□□ -1.85
SRP54P61011 AL358832.1-201ENST00000497800 389 ntBASIC3.48□□□□□ -1.85
SRP54P61011 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.48□□□□□ -1.85
SRP54P61011 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.48□□□□□ -1.85
SRP54P61011 RNU6-579P-201ENST00000516879 102 ntBASIC3.48□□□□□ -1.85
SRP54P61011 AL139174.1-201ENST00000531489 886 ntBASIC3.48□□□□□ -1.85
SRP54P61011 CD69-203ENST00000536709 1020 ntTSL 2 BASIC3.48□□□□□ -1.85
SRP54P61011 AC018630.1-201ENST00000541376 925 ntBASIC3.48□□□□□ -1.85
SRP54P61011 AC005908.2-201ENST00000546078 530 ntTSL 3 BASIC3.48□□□□□ -1.85
SRP54P61011 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.48□□□□□ -1.85
SRP54P61011 AC093025.1-201ENST00000547795 569 ntTSL 2 BASIC3.48□□□□□ -1.85
SRP54P61011 NCAPGP2-201ENST00000557911 754 ntBASIC3.48□□□□□ -1.85
SRP54P61011 AC099313.1-201ENST00000568437 452 ntTSL 2 BASIC3.48□□□□□ -1.85
SRP54P61011 MIR5186-201ENST00000577504 120 ntBASIC3.48□□□□□ -1.85
SRP54P61011 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC3.48□□□□□ -1.85
SRP54P61011 SNORD84-203ENST00000584275 78 ntBASIC3.48□□□□□ -1.85
SRP54P61011 AC023158.2-201ENST00000614876 543 ntBASIC3.48□□□□□ -1.85
SRP54P61011 BX664730.1-201ENST00000616196 800 ntTSL 5 BASIC3.48□□□□□ -1.85
SRP54P61011 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.48□□□□□ -1.85
SRP54P61011 AL360181.4-201ENST00000621752 134 ntBASIC3.48□□□□□ -1.85
SRP54P61011 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
SRP54P61011 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.48□□□□□ -1.85
SRP54P61011 OR51L1-203ENST00000641819 7300 ntAPPRIS P1 BASIC3.48□□□□□ -1.85
SRP54P61011 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC3.48□□□□□ -1.85
SRP54P61011 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.48□□□□□ -1.85
SRP54P61011 MTND4P9-201ENST00000507819 1346 ntBASIC3.47□□□□□ -1.85
SRP54P61011 SRP72P2-201ENST00000344851 1979 ntBASIC3.47□□□□□ -1.85
SRP54P61011 CCDC30-203ENST00000428554 3063 ntAPPRIS P2 TSL 5 BASIC3.47□□□□□ -1.85
SRP54P61011 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SRP54P61011 RNU4-35P-201ENST00000362588 141 ntBASIC3.47□□□□□ -1.85
SRP54P61011 RNU6-216P-201ENST00000363282 104 ntBASIC3.47□□□□□ -1.85
SRP54P61011 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
SRP54P61011 SNORD51-201ENST00000384320 80 ntBASIC3.47□□□□□ -1.85
SRP54P61011 RNA5SP129-201ENST00000410276 118 ntBASIC3.47□□□□□ -1.85
SRP54P61011 OR4K6P-201ENST00000416478 897 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.47□□□□□ -1.85
SRP54P61011 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.47□□□□□ -1.85
SRP54P61011 AL358794.1-201ENST00000445689 381 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC3.47□□□□□ -1.85
SRP54P61011 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
SRP54P61011 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC3.47□□□□□ -1.85
SRP54P61011 AC023598.1-201ENST00000472521 361 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC3.47□□□□□ -1.85
SRP54P61011 AC107021.1-202ENST00000480247 555 ntTSL 5 BASIC3.47□□□□□ -1.85
SRP54P61011 RPL32P34-201ENST00000486380 400 ntBASIC3.47□□□□□ -1.85
SRP54P61011 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AC004062.1-201ENST00000509926 645 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AC010625.1-201ENST00000511296 403 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.47□□□□□ -1.85
SRP54P61011 RNA5SP468-201ENST00000516782 93 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.47□□□□□ -1.85
SRP54P61011 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.47□□□□□ -1.85
SRP54P61011 AC013509.1-201ENST00000524269 339 ntTSL 3 BASIC3.47□□□□□ -1.85
SRP54P61011 AP001636.2-201ENST00000525517 696 ntBASIC3.47□□□□□ -1.85
SRP54P61011 OR4P1P-201ENST00000530808 1136 ntBASIC3.47□□□□□ -1.85
SRP54P61011 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.47□□□□□ -1.85
SRP54P61011 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.47□□□□□ -1.85
SRP54P61011 AC126177.3-201ENST00000551839 688 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms