Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RPL23AP31-201ENST00000456160 467 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDL3P58872 AC005150.1-201ENST00000512831 628 ntTSL 2 BASIC4.68□□□□□ -1.66
RHBDL3P58872 MTND5P4-201ENST00000514978 288 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 RNU6-678P-201ENST00000516832 109 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 RNU6-714P-201ENST00000516963 103 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 AP000926.4-201ENST00000527351 454 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 AC005225.1-201ENST00000553394 937 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDL3P58872 AC136618.2-201ENST00000575091 400 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 FAM60BP-201ENST00000578364 658 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC4.68□□□□□ -1.66
RHBDL3P58872 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.68□□□□□ -1.66
RHBDL3P58872 AC104662.1-201ENST00000604448 511 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 AC103710.3-201ENST00000608157 948 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC4.68□□□□□ -1.66
RHBDL3P58872 AL391497.1-201ENST00000608671 547 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC4.68□□□□□ -1.66
RHBDL3P58872 AL590099.1-201ENST00000615276 138 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC4.68□□□□□ -1.66
RHBDL3P58872 MAPK10-320ENST00000641462 6696 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
RHBDL3P58872 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
RHBDL3P58872 AC024560.2-201ENST00000507981 1497 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 AP002001.2-201ENST00000529025 1469 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 Z82217.1-201ENST00000625157 8149 ntBASIC4.68□□□□□ -1.66
RHBDL3P58872 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDL3P58872 AC024940.1-203ENST00000398963 4423 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 RNF128-202ENST00000324342 2654 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDL3P58872 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDL3P58872 PTPRD-203ENST00000381196 9911 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 THOC2-202ENST00000355725 4930 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 IFI16-208ENST00000448393 2245 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 TRAV8-1-201ENST00000390430 473 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AL356421.1-201ENST00000403255 413 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 SNORA3.3-201ENST00000408712 125 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 LINC01717-201ENST00000415754 527 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AL451062.2-201ENST00000427515 271 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 MTND1P31-201ENST00000449206 961 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 AL646090.1-201ENST00000449928 492 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AC098826.2-201ENST00000452011 651 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDL3P58872 PLCE1-AS2-205ENST00000453183 427 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AL158069.1-201ENST00000454131 455 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AC010469.1-201ENST00000463864 576 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 AC017015.1-201ENST00000477387 286 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 AP001025.2-201ENST00000490908 477 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 AC106872.3-201ENST00000495104 446 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 AC016933.1-201ENST00000504735 539 ntTSL 2 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDL3P58872 IL7R-208ENST00000511982 612 ntTSL 2 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDL3P58872 LINC02484-201ENST00000513843 546 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AC025524.2-207ENST00000520097 506 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDL3P58872 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC4.67□□□□□ -1.66
RHBDL3P58872 SNRPGP16-201ENST00000533275 226 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDL3P58872 CCNG2P1-201ENST00000549521 1000 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 CYP4A43P-201ENST00000568156 121 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 AC135050.5-201ENST00000576336 543 ntTSL 4 BASIC4.67□□□□□ -1.66
RHBDL3P58872 LIVAR-201ENST00000578633 384 ntTSL 3 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AC090616.5-201ENST00000581225 299 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AP001029.3-201ENST00000588063 596 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 NIFKP6-201ENST00000598115 845 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC4.67□□□□□ -1.66
RHBDL3P58872 AL355493.4-201ENST00000618530 292 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 AC079416.3-201ENST00000624479 549 ntBASIC4.67□□□□□ -1.66
RHBDL3P58872 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.67□□□□□ -1.66
RHBDL3P58872 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDL3P58872 TTC41P-203ENST00000548527 1475 ntTSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDL3P58872 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
RHBDL3P58872 C6orf10-203ENST00000442822 1696 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
RHBDL3P58872 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
RHBDL3P58872 STON1-GTF2A1L-202ENST00000394754 3824 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 FAM126B-202ENST00000418596 9333 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
RHBDL3P58872 DEFB108B-201ENST00000328698 222 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
RHBDL3P58872 RNU6-289P-201ENST00000364093 107 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 RNU6-1200P-201ENST00000384162 107 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RHBDL3P58872 AL590084.2-201ENST00000401481 382 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 MTND4P13-201ENST00000402078 1023 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 SNORA3C-201ENST00000408792 125 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 RNU4-65P-201ENST00000410473 140 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 SNORA57.3-201ENST00000411095 141 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 SYF2P2-201ENST00000417620 583 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 AC107081.2-201ENST00000425779 802 ntTSL 5 BASIC4.66□□□□□ -1.66
RHBDL3P58872 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDL3P58872 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC4.66□□□□□ -1.66
RHBDL3P58872 IGKV3D-7-201ENST00000443397 384 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
RHBDL3P58872 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC4.66□□□□□ -1.66
RHBDL3P58872 MTCYBP3-201ENST00000445588 1137 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 MTCO1P27-201ENST00000448269 226 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 RPL7L1P8-201ENST00000469911 741 ntBASIC4.66□□□□□ -1.66
RHBDL3P58872 RPL7P23-201ENST00000493874 747 ntBASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 81.6 ms