Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 TRAV23DV6-201ENST00000390451 409 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CLRN1P58418 AL354719.1-201ENST00000406535 843 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 RNU2-62P-201ENST00000410868 191 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 SNRPFP1-201ENST00000414761 252 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.32□□□□□ -1.72
CLRN1P58418 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.32□□□□□ -1.72
CLRN1P58418 AL451139.1-201ENST00000434718 346 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 RPS20P1-201ENST00000434853 354 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 AL627308.1-201ENST00000435693 821 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 CACYBPP2-201ENST00000453625 678 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 AC108059.3-201ENST00000456388 214 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 RN7SL591P-201ENST00000496150 292 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC017037.2-201ENST00000513850 890 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 HIGD1AP3-201ENST00000515857 278 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 ARL2BPP2-201ENST00000550907 489 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 SP2-AS1-204ENST00000585280 405 ntTSL 3 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC105224.1-201ENST00000587055 421 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC087763.1-201ENST00000603391 286 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 SDR42E1P1-201ENST00000611327 477 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 AC006329.2-201ENST00000611491 394 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 AL590491.2-201ENST00000614608 499 ntTSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC010133.1-201ENST00000615809 842 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 AC233309.1-201ENST00000619522 751 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 PTP4A2-219ENST00000626355 606 ntTSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 PTP4A2-220ENST00000627328 615 ntTSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC112487.2-201ENST00000637950 304 ntBASIC4.32□□□□□ -1.72
CLRN1P58418 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLRN1P58418 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC4.32□□□□□ -1.72
CLRN1P58418 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLRN1P58418 SERPINI2-201ENST00000264677 1678 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CLRN1P58418 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC4.32□□□□□ -1.72
CLRN1P58418 AC104260.2-201ENST00000623551 3497 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.31□□□□□ -1.72
CLRN1P58418 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 AC006020.1-201ENST00000420179 1854 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 SMG1P6-201ENST00000532337 2930 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 RPL7P26-201ENST00000333817 754 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 Y_RNA.142-201ENST00000363491 102 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.31□□□□□ -1.72
CLRN1P58418 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 RNU6-767P-201ENST00000384132 107 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 Y_RNA.509-201ENST00000384506 99 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 MT-TC-201ENST00000387405 66 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 TRAJ21-201ENST00000390516 55 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CLRN1P58418 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 MIR1178-201ENST00000408396 91 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 HMGN1P24-201ENST00000412282 298 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.31□□□□□ -1.72
CLRN1P58418 RPL23AP27-201ENST00000415161 451 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 CHEK2P3-201ENST00000416118 248 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 EIF4HP2-201ENST00000424380 563 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.31□□□□□ -1.72
CLRN1P58418 LINC01506-201ENST00000432148 495 ntTSL 2 BASIC4.31□□□□□ -1.72
CLRN1P58418 RPS20P5-201ENST00000434808 360 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC112498.1-201ENST00000444401 332 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC4.31□□□□□ -1.72
CLRN1P58418 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC4.31□□□□□ -1.72
CLRN1P58418 AC006512.1-201ENST00000468816 291 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC078785.3-201ENST00000476607 425 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC023424.1-201ENST00000496058 459 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 HSPD1P15-201ENST00000505573 1122 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 GAPDHP56-201ENST00000506031 988 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC111000.3-201ENST00000508057 576 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC114797.1-201ENST00000514003 728 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 RNU6-798P-201ENST00000516912 103 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.31□□□□□ -1.72
CLRN1P58418 AC079209.1-202ENST00000521953 522 ntTSL 3 BASIC4.31□□□□□ -1.72
CLRN1P58418 PTP4A1P6-201ENST00000531034 478 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 OR5B19P-201ENST00000531766 928 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC107918.3-201ENST00000533272 382 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC4.31□□□□□ -1.72
CLRN1P58418 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC4.31□□□□□ -1.72
CLRN1P58418 AC087477.6-201ENST00000559595 843 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC4.31□□□□□ -1.72
CLRN1P58418 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC4.31□□□□□ -1.72
CLRN1P58418 RN7SL435P-201ENST00000584418 282 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.31□□□□□ -1.72
CLRN1P58418 AC011487.3-201ENST00000593607 453 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC103710.2-201ENST00000609912 942 ntBASIC4.31□□□□□ -1.72
CLRN1P58418 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.31□□□□□ -1.72
CLRN1P58418 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.31□□□□□ -1.72
CLRN1P58418 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 CTNNA3-203ENST00000433211 10675 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CLRN1P58418 AL136164.3-201ENST00000624429 3978 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 156.7 ms