Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AL121978.1-201ENST00000402778 359 ntBASIC3.17□□□□□ -1.9
CDH6P55285 RNA5SP274-201ENST00000410484 108 ntBASIC3.17□□□□□ -1.9
CDH6P55285 RPL21P40-201ENST00000428586 483 ntBASIC3.17□□□□□ -1.9
CDH6P55285 AC004160.1-205ENST00000428967 577 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH6P55285 LINC00446-202ENST00000438327 357 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH6P55285 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH6P55285 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH6P55285 RPL17P49-201ENST00000443728 411 ntBASIC3.17□□□□□ -1.9
CDH6P55285 TMEM247-203ENST00000449601 741 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH6P55285 AL096803.2-201ENST00000450032 677 ntBASIC3.17□□□□□ -1.9
CDH6P55285 AC098820.1-201ENST00000453157 512 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH6P55285 DCLRE1CP1-201ENST00000454630 470 ntBASIC3.17□□□□□ -1.9
CDH6P55285 NAP1L1P3-201ENST00000462291 880 ntBASIC3.17□□□□□ -1.9
CDH6P55285 AC034236.1-201ENST00000469891 373 ntBASIC3.17□□□□□ -1.9
CDH6P55285 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH6P55285 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
CDH6P55285 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH6P55285 AC025768.1-201ENST00000510057 267 ntBASIC3.17□□□□□ -1.9
CDH6P55285 RNA5SP380-201ENST00000517190 98 ntBASIC3.17□□□□□ -1.9
CDH6P55285 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH6P55285 TIMM9-209ENST00000556367 572 ntTSL 2 BASIC3.17□□□□□ -1.9
CDH6P55285 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH6P55285 LINC01491-202ENST00000558792 439 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH6P55285 AC007598.2-201ENST00000569490 539 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH6P55285 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.17□□□□□ -1.9
CDH6P55285 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC3.17□□□□□ -1.9
CDH6P55285 XIAPP1-201ENST00000603162 600 ntBASIC3.17□□□□□ -1.9
CDH6P55285 LINC00310-205ENST00000609062 863 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH6P55285 AC026422.1-201ENST00000623961 452 ntBASIC3.17□□□□□ -1.9
CDH6P55285 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC3.17□□□□□ -1.9
CDH6P55285 MTND2P41-201ENST00000637599 773 ntBASIC3.17□□□□□ -1.9
CDH6P55285 GMFB-208ENST00000554908 6721 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
CDH6P55285 KIAA1107-202ENST00000636278 4065 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
CDH6P55285 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH6P55285 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH6P55285 ABCG2-204ENST00000515655 4276 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH6P55285 RPL23AP57-201ENST00000332361 466 ntBASIC3.16□□□□□ -1.9
CDH6P55285 DYNLT3P1-201ENST00000378574 347 ntBASIC3.16□□□□□ -1.9
CDH6P55285 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
CDH6P55285 RNU6-730P-201ENST00000383954 104 ntBASIC3.16□□□□□ -1.9
CDH6P55285 RNU6-821P-201ENST00000390995 107 ntBASIC3.16□□□□□ -1.9
CDH6P55285 AP002784.2-201ENST00000397300 549 ntBASIC3.16□□□□□ -1.9
CDH6P55285 LHFPL3-AS1-203ENST00000417290 950 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
CDH6P55285 BTBD7P2-201ENST00000441962 620 ntBASIC3.16□□□□□ -1.9
CDH6P55285 CDC42P1-201ENST00000456658 548 ntBASIC3.16□□□□□ -1.9
CDH6P55285 TOPORSLP1-202ENST00000469756 969 ntTSL 3 BASIC3.16□□□□□ -1.9
CDH6P55285 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH6P55285 RN7SL504P-201ENST00000494496 287 ntBASIC3.16□□□□□ -1.9
CDH6P55285 AC119751.1-201ENST00000513357 765 ntBASIC3.16□□□□□ -1.9
CDH6P55285 NIFKP8-201ENST00000560500 874 ntBASIC3.16□□□□□ -1.9
CDH6P55285 AC079148.1-201ENST00000565944 819 ntBASIC3.16□□□□□ -1.9
CDH6P55285 AC016866.2-201ENST00000585251 502 ntTSL 2 BASIC3.16□□□□□ -1.9
CDH6P55285 AC011518.1-202ENST00000592668 407 ntTSL 5 BASIC3.16□□□□□ -1.9
CDH6P55285 AC133794.1-201ENST00000602731 914 ntBASIC3.16□□□□□ -1.9
CDH6P55285 AC007179.3-201ENST00000604976 235 ntBASIC3.16□□□□□ -1.9
CDH6P55285 AC097460.3-201ENST00000623099 442 ntBASIC3.16□□□□□ -1.9
CDH6P55285 AC130650.2-201ENST00000618736 2403 ntBASIC3.16□□□□□ -1.9
CDH6P55285 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC3.16□□□□□ -1.9
CDH6P55285 AL645568.2-201ENST00000432815 1337 ntBASIC3.16□□□□□ -1.9
CDH6P55285 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.16□□□□□ -1.9
CDH6P55285 AC093831.2-201ENST00000624393 3427 ntBASIC3.15□□□□□ -1.9
CDH6P55285 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC3.15□□□□□ -1.9
CDH6P55285 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.15□□□□□ -1.9
CDH6P55285 NPVF-201ENST00000222674 1190 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH6P55285 AC073325.2-201ENST00000339545 159 ntBASIC3.15□□□□□ -1.91
CDH6P55285 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH6P55285 AC246680.2-201ENST00000422106 389 ntBASIC3.15□□□□□ -1.91
CDH6P55285 AL590783.1-201ENST00000424138 456 ntTSL 2 BASIC3.15□□□□□ -1.91
CDH6P55285 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH6P55285 OFD1P12Y-201ENST00000427963 1207 ntBASIC3.15□□□□□ -1.91
CDH6P55285 AC008067.1-203ENST00000430876 359 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH6P55285 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.15□□□□□ -1.91
CDH6P55285 DARS-AS1-205ENST00000444649 558 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH6P55285 AL020998.1-201ENST00000444923 229 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH6P55285 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.15□□□□□ -1.91
CDH6P55285 TRBV26-201ENST00000456572 344 ntBASIC3.15□□□□□ -1.91
CDH6P55285 BX510359.1-201ENST00000456973 237 ntBASIC3.15□□□□□ -1.91
CDH6P55285 RPS3AP43-201ENST00000479743 781 ntBASIC3.15□□□□□ -1.91
CDH6P55285 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDH6P55285 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH6P55285 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH6P55285 RN7SKP282-201ENST00000516824 299 ntBASIC3.15□□□□□ -1.91
CDH6P55285 AC104211.1-202ENST00000521307 866 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH6P55285 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
CDH6P55285 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH6P55285 SNRPGP1-201ENST00000553864 222 ntBASIC3.15□□□□□ -1.91
CDH6P55285 LINC02345-201ENST00000557883 766 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH6P55285 AC087481.2-201ENST00000565492 330 ntBASIC3.15□□□□□ -1.91
CDH6P55285 PWRN3-201ENST00000566797 849 ntTSL 5 BASIC3.15□□□□□ -1.91
CDH6P55285 AC034268.2-201ENST00000571784 482 ntBASIC3.15□□□□□ -1.91
CDH6P55285 RN7SL622P-201ENST00000585292 275 ntBASIC3.15□□□□□ -1.91
CDH6P55285 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.15□□□□□ -1.91
CDH6P55285 AC107294.3-201ENST00000609211 526 ntBASIC3.15□□□□□ -1.91
CDH6P55285 AC096577.2-201ENST00000611455 153 ntBASIC3.15□□□□□ -1.91
CDH6P55285 AL118556.2-201ENST00000614375 824 ntBASIC3.15□□□□□ -1.91
CDH6P55285 AC018755.4-201ENST00000619715 454 ntBASIC3.15□□□□□ -1.91
CDH6P55285 AL590240.3-201ENST00000621416 943 ntBASIC3.15□□□□□ -1.91
CDH6P55285 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
CDH6P55285 ANGPTL1-201ENST00000234816 3348 ntAPPRIS P1 TSL 1 (best) BASIC3.14□□□□□ -1.91
CDH6P55285 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.14□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 93.2 ms