Protein–RNA interactions for Protein: P55072

VCP, Transitional endoplasmic reticulum ATPase, humanhuman

Known RBP Predictions only

Length 806 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCPP55072 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
VCPP55072 AC092326.2-201ENST00000624772 1561 ntBASIC3.63□□□□□ -1.83
VCPP55072 FASTKD1-205ENST00000453929 2791 ntTSL 2 BASIC3.63□□□□□ -1.83
VCPP55072 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 DICER1-203ENST00000526495 10331 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
VCPP55072 AL021368.2-201ENST00000606125 5352 ntBASIC3.62□□□□□ -1.83
VCPP55072 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.62□□□□□ -1.83
VCPP55072 C1orf189-201ENST00000368525 387 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
VCPP55072 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.62□□□□□ -1.83
VCPP55072 RNU6-1151P-201ENST00000384684 107 ntBASIC3.62□□□□□ -1.83
VCPP55072 AIMP1P1-201ENST00000418670 937 ntBASIC3.62□□□□□ -1.83
VCPP55072 RPS15AP6-201ENST00000420703 385 ntBASIC3.62□□□□□ -1.83
VCPP55072 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.62□□□□□ -1.83
VCPP55072 AL354692.1-201ENST00000423044 315 ntBASIC3.62□□□□□ -1.83
VCPP55072 RPS6P14-201ENST00000425165 719 ntBASIC3.62□□□□□ -1.83
VCPP55072 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC3.62□□□□□ -1.83
VCPP55072 MTCYBP15-201ENST00000433123 1127 ntBASIC3.62□□□□□ -1.83
VCPP55072 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC3.62□□□□□ -1.83
VCPP55072 RAB11AP1-201ENST00000442978 646 ntBASIC3.62□□□□□ -1.83
VCPP55072 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 AL020994.3-201ENST00000449126 274 ntTSL 3 BASIC3.62□□□□□ -1.83
VCPP55072 RPL7P52-201ENST00000449200 742 ntBASIC3.62□□□□□ -1.83
VCPP55072 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.62□□□□□ -1.83
VCPP55072 RPS4XP2-201ENST00000458402 793 ntBASIC3.62□□□□□ -1.83
VCPP55072 SNORA70.19-201ENST00000516717 90 ntBASIC3.62□□□□□ -1.83
VCPP55072 HIGD1AP6-201ENST00000521833 279 ntBASIC3.62□□□□□ -1.83
VCPP55072 AP001207.1-201ENST00000524051 481 ntBASIC3.62□□□□□ -1.83
VCPP55072 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC3.62□□□□□ -1.83
VCPP55072 AL356804.1-201ENST00000553791 448 ntTSL 5 BASIC3.62□□□□□ -1.83
VCPP55072 ZNF971P-201ENST00000562068 1249 ntBASIC3.62□□□□□ -1.83
VCPP55072 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.62□□□□□ -1.83
VCPP55072 AC002487.1-201ENST00000604565 994 ntBASIC3.62□□□□□ -1.83
VCPP55072 AL158050.2-201ENST00000605336 568 ntBASIC3.62□□□□□ -1.83
VCPP55072 OR2AS2P-201ENST00000606902 342 ntBASIC3.62□□□□□ -1.83
VCPP55072 AC097504.2-201ENST00000608088 454 ntBASIC3.62□□□□□ -1.83
VCPP55072 AL450489.1-201ENST00000612071 468 ntBASIC3.62□□□□□ -1.83
VCPP55072 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.62□□□□□ -1.83
VCPP55072 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 LRRTM2-201ENST00000274711 6017 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
VCPP55072 MTND4P34-201ENST00000572715 1371 ntBASIC3.62□□□□□ -1.83
VCPP55072 AL645937.1-201ENST00000641739 1652 ntBASIC3.62□□□□□ -1.83
VCPP55072 SGO1P1-201ENST00000603525 1447 ntBASIC3.61□□□□□ -1.83
VCPP55072 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VCPP55072 OR8K5-201ENST00000313447 924 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VCPP55072 UBE2Q2P1-202ENST00000354771 883 ntBASIC3.61□□□□□ -1.83
VCPP55072 RNU6-236P-201ENST00000363886 106 ntBASIC3.61□□□□□ -1.83
VCPP55072 RNU6-374P-201ENST00000364146 108 ntBASIC3.61□□□□□ -1.83
VCPP55072 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
VCPP55072 MIR16-1-201ENST00000385271 89 ntBASIC3.61□□□□□ -1.83
VCPP55072 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
VCPP55072 RNU6-298P-201ENST00000390888 96 ntBASIC3.61□□□□□ -1.83
VCPP55072 GSTA8P-201ENST00000404253 637 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.61□□□□□ -1.83
VCPP55072 OR51A3P-201ENST00000413596 924 ntBASIC3.61□□□□□ -1.83
VCPP55072 RPL31P12-201ENST00000422587 358 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.61□□□□□ -1.83
VCPP55072 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.61□□□□□ -1.83
VCPP55072 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.61□□□□□ -1.83
VCPP55072 AC006028.1-201ENST00000438379 402 ntBASIC3.61□□□□□ -1.83
VCPP55072 RPL32P28-201ENST00000443577 397 ntBASIC3.61□□□□□ -1.83
VCPP55072 ELOCP13-201ENST00000443934 329 ntBASIC3.61□□□□□ -1.83
VCPP55072 RPS26P56-201ENST00000444468 240 ntBASIC3.61□□□□□ -1.83
VCPP55072 RPL7P59-201ENST00000447700 943 ntBASIC3.61□□□□□ -1.83
VCPP55072 RPL12P26-201ENST00000452430 487 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC010401.1-201ENST00000463867 348 ntBASIC3.61□□□□□ -1.83
VCPP55072 RPL21P104-201ENST00000464143 478 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC012181.1-201ENST00000479895 423 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC021205.2-201ENST00000480069 347 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC004924.1-201ENST00000480160 781 ntBASIC3.61□□□□□ -1.83
VCPP55072 RAD51AP1P1-201ENST00000484195 1001 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.61□□□□□ -1.83
VCPP55072 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC3.61□□□□□ -1.83
VCPP55072 MIR2276-201ENST00000516886 89 ntBASIC3.61□□□□□ -1.83
VCPP55072 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
VCPP55072 IGHV3-76-201ENST00000522465 295 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC104417.1-201ENST00000523974 751 ntBASIC3.61□□□□□ -1.83
VCPP55072 AP001636.2-201ENST00000525517 696 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC109635.4-202ENST00000531666 412 ntBASIC3.61□□□□□ -1.83
VCPP55072 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.61□□□□□ -1.83
VCPP55072 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.61□□□□□ -1.83
VCPP55072 TIMM9-203ENST00000555061 598 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
VCPP55072 AC106028.2-201ENST00000555325 464 ntTSL 4 BASIC3.61□□□□□ -1.83
VCPP55072 YWHAZP1-201ENST00000556286 722 ntBASIC3.61□□□□□ -1.83
VCPP55072 CERS3-AS1-201ENST00000560643 372 ntTSL 3 BASIC3.61□□□□□ -1.83
VCPP55072 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.61□□□□□ -1.83
VCPP55072 AL020997.3-201ENST00000602843 359 ntBASIC3.61□□□□□ -1.83
VCPP55072 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.61□□□□□ -1.83
VCPP55072 RPAP2P1-201ENST00000603626 1168 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC093673.2-201ENST00000609674 331 ntBASIC3.61□□□□□ -1.83
VCPP55072 AC026422.1-201ENST00000623961 452 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 198.3 ms