Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 HMGB1P1-201ENST00000522557 636 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCS2P54868 OR8L1P-201ENST00000534005 955 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 OR6C73P-201ENST00000546432 358 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AL020997.3-201ENST00000602843 359 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 RPP40P2-201ENST00000603596 712 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AC112220.2-201ENST00000605513 533 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCS2P54868 AL355816.2-201ENST00000610049 647 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 RN7SL853P-201ENST00000617250 223 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 FAM157B-203ENST00000639350 358 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 AL079305.1-201ENST00000623159 3008 ntBASIC3.52□□□□□ -1.85
HMGCS2P54868 C6orf10-209ENST00000612031 2179 ntAPPRIS ALT2 TSL 5 BASIC3.52□□□□□ -1.85
HMGCS2P54868 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.52□□□□□ -1.85
HMGCS2P54868 ARAP2-210ENST00000618163 2592 ntTSL 5 BASIC3.52□□□□□ -1.85
HMGCS2P54868 VSTM2A-OT1-201ENST00000456049 3031 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
HMGCS2P54868 AC025263.3-201ENST00000622965 1396 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGCS2P54868 HDX-201ENST00000297977 6200 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
HMGCS2P54868 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HMGCS2P54868 AL512646.1-201ENST00000269395 1077 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC3.51□□□□□ -1.85
HMGCS2P54868 AL158212.2-201ENST00000369391 460 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS2P54868 SPANXN4-201ENST00000370504 560 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
HMGCS2P54868 SNORA48.8-201ENST00000391324 134 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 AL138878.1-201ENST00000405131 347 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 RPS15AP40-201ENST00000419621 391 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 MTCO2P17-201ENST00000424336 677 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS2P54868 Z80107.1-201ENST00000436830 412 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS2P54868 PPIAP17-201ENST00000438507 471 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS2P54868 HMGN2P7-201ENST00000456186 273 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 AC104689.1-201ENST00000473356 768 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 AC093755.1-201ENST00000512950 1023 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 MIR2114-201ENST00000516645 80 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGCS2P54868 AC008147.1-201ENST00000551284 325 ntTSL 3 BASIC3.51□□□□□ -1.85
HMGCS2P54868 NIFKP8-201ENST00000560500 874 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 AC007495.1-203ENST00000569025 888 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGCS2P54868 AC090312.2-201ENST00000582687 378 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 ELOCP29-201ENST00000588193 334 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 MTCO2P2-201ENST00000591258 225 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 RNU4-5P-201ENST00000607255 135 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 AC123767.1-202ENST00000620407 817 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.51□□□□□ -1.85
HMGCS2P54868 MTND5P3-201ENST00000438536 1800 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 AC007496.3-201ENST00000624987 3443 ntBASIC3.51□□□□□ -1.85
HMGCS2P54868 TARID-205ENST00000607033 2960 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
HMGCS2P54868 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HMGCS2P54868 PWAR6-201ENST00000552334 4618 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 IFT80-220ENST00000483465 4044 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS2P54868 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS2P54868 MCF2-210ENST00000536274 3461 ntAPPRIS ALT2 TSL 2 BASIC3.5□□□□□ -1.85
HMGCS2P54868 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HMGCS2P54868 OR4P4-201ENST00000314612 939 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
HMGCS2P54868 AC073325.2-201ENST00000339545 159 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 RNA5SP126-201ENST00000365092 109 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 OR1L1-202ENST00000373686 1083 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 RNU6-301P-201ENST00000384277 107 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 RNA5SP80-201ENST00000410475 111 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS2P54868 AL160272.1-201ENST00000421509 521 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS2P54868 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS2P54868 RPS26P40-201ENST00000435209 294 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AC234064.1-201ENST00000436312 247 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AC105272.1-201ENST00000438604 198 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS2P54868 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS2P54868 LINC01611-203ENST00000454981 504 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS2P54868 RPS20P32-201ENST00000456044 356 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS2P54868 SOX2-OT-207ENST00000476964 606 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS2P54868 AC106872.2-201ENST00000494303 480 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS2P54868 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGCS2P54868 LINC02428-201ENST00000508099 527 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGCS2P54868 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC3.5□□□□□ -1.85
HMGCS2P54868 SCGB1D5P-201ENST00000515134 247 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 snoZ278.1-201ENST00000517059 112 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC3.5□□□□□ -1.85
HMGCS2P54868 AL139174.1-201ENST00000531489 886 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AP004242.1-201ENST00000533701 349 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AC004217.3-201ENST00000551552 878 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS2P54868 AC010653.1-201ENST00000571108 881 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC3.5□□□□□ -1.85
HMGCS2P54868 MIR3162-201ENST00000581818 82 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
HMGCS2P54868 AC063944.1-210ENST00000593837 519 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGCS2P54868 VN1R90P-201ENST00000595717 726 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 VN1R74P-201ENST00000613259 503 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AP003485.2-201ENST00000623636 610 ntBASIC3.5□□□□□ -1.85
HMGCS2P54868 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC3.5□□□□□ -1.85
HMGCS2P54868 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
HMGCS2P54868 CPD-202ENST00000543464 4007 ntTSL 2 BASIC3.49□□□□□ -1.85
HMGCS2P54868 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
HMGCS2P54868 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
HMGCS2P54868 SNORA18.3-201ENST00000384122 132 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 103.8 ms