Protein–RNA interactions for Protein: P53621

COPA, Coatomer subunit alpha, humanhuman

Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPAP53621 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.44□□□□□ -1.7
COPAP53621 RNU2-15P-201ENST00000410692 191 ntBASIC4.44□□□□□ -1.7
COPAP53621 MTCO1P17-201ENST00000411522 491 ntBASIC4.44□□□□□ -1.7
COPAP53621 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC4.44□□□□□ -1.7
COPAP53621 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC4.44□□□□□ -1.7
COPAP53621 CYP4F29P-201ENST00000420685 446 ntBASIC4.44□□□□□ -1.7
COPAP53621 SLC44A3-AS1-205ENST00000424505 612 ntBASIC4.44□□□□□ -1.7
COPAP53621 OFD1P13Y-201ENST00000431179 1232 ntBASIC4.44□□□□□ -1.7
COPAP53621 CKS1BP5-201ENST00000434172 273 ntBASIC4.44□□□□□ -1.7
COPAP53621 OR4C10P-201ENST00000434991 931 ntBASIC4.44□□□□□ -1.7
COPAP53621 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.44□□□□□ -1.7
COPAP53621 SDCBPP1-201ENST00000440192 890 ntBASIC4.44□□□□□ -1.7
COPAP53621 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC4.44□□□□□ -1.7
COPAP53621 AC239367.2-201ENST00000447309 705 ntBASIC4.44□□□□□ -1.7
COPAP53621 AC114755.5-201ENST00000447760 831 ntBASIC4.44□□□□□ -1.7
COPAP53621 RPS20P32-201ENST00000456044 356 ntBASIC4.44□□□□□ -1.7
COPAP53621 RPS20P24-201ENST00000457473 361 ntBASIC4.44□□□□□ -1.7
COPAP53621 ATP5J2-209ENST00000488775 306 ntTSL 2 BASIC4.44□□□□□ -1.7
COPAP53621 AC010255.1-201ENST00000504829 731 ntTSL 5 BASIC4.44□□□□□ -1.7
COPAP53621 AC010625.1-201ENST00000511296 403 ntBASIC4.44□□□□□ -1.7
COPAP53621 LINC02149-201ENST00000511443 558 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
COPAP53621 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC4.44□□□□□ -1.7
COPAP53621 AC093853.1-201ENST00000515689 483 ntBASIC4.44□□□□□ -1.7
COPAP53621 RNU2-58P-201ENST00000516403 183 ntBASIC4.44□□□□□ -1.7
COPAP53621 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.44□□□□□ -1.7
COPAP53621 AC022880.1-201ENST00000534017 973 ntBASIC4.44□□□□□ -1.7
COPAP53621 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.44□□□□□ -1.7
COPAP53621 AC087683.1-201ENST00000591187 441 ntBASIC4.44□□□□□ -1.7
COPAP53621 AC010201.1-201ENST00000605051 540 ntBASIC4.44□□□□□ -1.7
COPAP53621 AL109618.2-201ENST00000605527 211 ntBASIC4.44□□□□□ -1.7
COPAP53621 AC015540.1-201ENST00000615828 501 ntBASIC4.44□□□□□ -1.7
COPAP53621 AC027807.2-201ENST00000616099 408 ntBASIC4.44□□□□□ -1.7
COPAP53621 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.44□□□□□ -1.7
COPAP53621 AC068792.1-201ENST00000621354 417 ntBASIC4.44□□□□□ -1.7
COPAP53621 AL359740.1-201ENST00000624340 592 ntBASIC4.44□□□□□ -1.7
COPAP53621 SMC6-203ENST00000402989 3729 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
COPAP53621 P2RY12-201ENST00000302632 1766 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPAP53621 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPAP53621 AJ009632.2-204ENST00000635621 1401 ntTSL 5 BASIC4.44□□□□□ -1.7
COPAP53621 MECOM-219ENST00000628990 4835 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPAP53621 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
COPAP53621 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC4.44□□□□□ -1.7
COPAP53621 ARHGAP42-201ENST00000298815 4752 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
COPAP53621 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC4.43□□□□□ -1.7
COPAP53621 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC4.43□□□□□ -1.7
COPAP53621 AC010186.3-201ENST00000537616 2508 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
COPAP53621 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPAP53621 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.43□□□□□ -1.7
COPAP53621 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
COPAP53621 AC006378.2-201ENST00000623178 2476 ntBASIC4.43□□□□□ -1.7
COPAP53621 MIR383-201ENST00000362257 73 ntBASIC4.43□□□□□ -1.7
COPAP53621 RNU6-744P-201ENST00000365557 107 ntBASIC4.43□□□□□ -1.7
COPAP53621 IVNS1ABP-201ENST00000367497 746 ntTSL 5 BASIC4.43□□□□□ -1.7
COPAP53621 RNU6-1316P-201ENST00000384242 108 ntBASIC4.43□□□□□ -1.7
COPAP53621 Y_RNA.493-201ENST00000384422 102 ntBASIC4.43□□□□□ -1.7
COPAP53621 DYDC1-203ENST00000421924 708 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPAP53621 AC005517.2-201ENST00000424673 553 ntBASIC4.43□□□□□ -1.7
COPAP53621 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.43□□□□□ -1.7
COPAP53621 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.43□□□□□ -1.7
COPAP53621 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC4.43□□□□□ -1.7
COPAP53621 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 ZNF385D-AS2-201ENST00000436306 424 ntTSL 5 BASIC4.43□□□□□ -1.7
COPAP53621 HLA-N-201ENST00000437516 135 ntBASIC4.43□□□□□ -1.7
COPAP53621 AL035258.1-201ENST00000439450 439 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 AL353748.1-201ENST00000440753 474 ntBASIC4.43□□□□□ -1.7
COPAP53621 AC114495.1-201ENST00000441274 436 ntBASIC4.43□□□□□ -1.7
COPAP53621 NFIA-AS1-201ENST00000442027 384 ntTSL 2 BASIC4.43□□□□□ -1.7
COPAP53621 AL592447.1-201ENST00000447592 540 ntBASIC4.43□□□□□ -1.7
COPAP53621 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 SNRPFP4-201ENST00000456366 242 ntBASIC4.43□□□□□ -1.7
COPAP53621 AP001025.2-201ENST00000490908 477 ntBASIC4.43□□□□□ -1.7
COPAP53621 RN7SL691P-201ENST00000494487 301 ntBASIC4.43□□□□□ -1.7
COPAP53621 ARL2BPP4-201ENST00000506854 471 ntBASIC4.43□□□□□ -1.7
COPAP53621 AC093824.1-201ENST00000508796 343 ntBASIC4.43□□□□□ -1.7
COPAP53621 AC005921.1-201ENST00000510589 286 ntBASIC4.43□□□□□ -1.7
COPAP53621 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC4.43□□□□□ -1.7
COPAP53621 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 NARSP2-202ENST00000522022 349 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 OR4R3P-201ENST00000525084 838 ntBASIC4.43□□□□□ -1.7
COPAP53621 MTND4LP18-201ENST00000526864 291 ntBASIC4.43□□□□□ -1.7
COPAP53621 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.43□□□□□ -1.7
COPAP53621 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 AC004943.1-202ENST00000558618 503 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 ZNF415P1-201ENST00000582279 1166 ntBASIC4.43□□□□□ -1.7
COPAP53621 MIR4307-201ENST00000582802 84 ntBASIC4.43□□□□□ -1.7
COPAP53621 AP005380.1-201ENST00000584896 547 ntTSL 4 BASIC4.43□□□□□ -1.7
COPAP53621 AC022916.3-201ENST00000592961 742 ntBASIC4.43□□□□□ -1.7
COPAP53621 AC007687.1-201ENST00000602704 304 ntBASIC4.43□□□□□ -1.7
COPAP53621 AL355812.1-201ENST00000603215 216 ntBASIC4.43□□□□□ -1.7
COPAP53621 CT45A9-201ENST00000604569 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPAP53621 AL591034.3-201ENST00000605511 685 ntBASIC4.43□□□□□ -1.7
COPAP53621 CT45A8-201ENST00000611438 770 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPAP53621 AC024941.1-201ENST00000612250 334 ntBASIC4.43□□□□□ -1.7
COPAP53621 AC099842.1-201ENST00000619919 596 ntBASIC4.43□□□□□ -1.7
COPAP53621 CT45A7-202ENST00000620885 578 ntAPPRIS P1 TSL 1 (best) BASIC4.43□□□□□ -1.7
COPAP53621 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC4.43□□□□□ -1.7
COPAP53621 RNA5SP196-201ENST00000625967 102 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 81.3 ms