Protein–RNA interactions for Protein: P53618

COPB1, Coatomer subunit beta, humanhuman

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1P53618 OR2B8P-201ENST00000432841 938 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AL353597.2-202ENST00000434901 373 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC4.38□□□□□ -1.71
COPB1P53618 DNAJC19P4-201ENST00000440115 345 ntBASIC4.38□□□□□ -1.71
COPB1P53618 RN7SL303P-201ENST00000469773 251 ntBASIC4.38□□□□□ -1.71
COPB1P53618 RPL23AP2-201ENST00000471227 466 ntBASIC4.38□□□□□ -1.71
COPB1P53618 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC4.38□□□□□ -1.71
COPB1P53618 AC010301.1-201ENST00000473936 355 ntBASIC4.38□□□□□ -1.71
COPB1P53618 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC4.38□□□□□ -1.71
COPB1P53618 RN7SL604P-201ENST00000492589 296 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AC109464.2-201ENST00000510242 943 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AC026412.2-201ENST00000512270 1075 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AC018797.3-201ENST00000513388 1241 ntBASIC4.38□□□□□ -1.71
COPB1P53618 RNA5SP143-201ENST00000516936 115 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC4.38□□□□□ -1.71
COPB1P53618 SNHG1-219ENST00000542112 780 ntTSL 3 BASIC4.38□□□□□ -1.71
COPB1P53618 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC4.38□□□□□ -1.71
COPB1P53618 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC4.38□□□□□ -1.71
COPB1P53618 HSPE1P3-201ENST00000559254 309 ntBASIC4.38□□□□□ -1.71
COPB1P53618 MIR1254-2-201ENST00000579553 63 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AC112187.2-201ENST00000604345 283 ntBASIC4.38□□□□□ -1.71
COPB1P53618 RBM11P1-201ENST00000604951 799 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AC097468.3-201ENST00000607956 456 ntBASIC4.38□□□□□ -1.71
COPB1P53618 YWHAEP7-201ENST00000617508 639 ntTSL 3 BASIC4.38□□□□□ -1.71
COPB1P53618 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.38□□□□□ -1.71
COPB1P53618 LARP1BP1-201ENST00000506036 1359 ntBASIC4.38□□□□□ -1.71
COPB1P53618 AC009951.1-201ENST00000623674 2614 ntBASIC4.38□□□□□ -1.71
COPB1P53618 PREPL-206ENST00000409936 5212 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COPB1P53618 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC4.37□□□□□ -1.71
COPB1P53618 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COPB1P53618 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COPB1P53618 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.37□□□□□ -1.71
COPB1P53618 RNU5E-5P-201ENST00000365379 116 ntBASIC4.37□□□□□ -1.71
COPB1P53618 RNU6-1293P-201ENST00000384077 107 ntBASIC4.37□□□□□ -1.71
COPB1P53618 SNORA57.1-201ENST00000391227 145 ntBASIC4.37□□□□□ -1.71
COPB1P53618 RNU6ATAC34P-201ENST00000408879 121 ntBASIC4.37□□□□□ -1.71
COPB1P53618 RNU6-248P-201ENST00000410720 107 ntBASIC4.37□□□□□ -1.71
COPB1P53618 HSPE1P12-201ENST00000412576 301 ntBASIC4.37□□□□□ -1.71
COPB1P53618 RPL23AP26-201ENST00000412728 464 ntBASIC4.37□□□□□ -1.71
COPB1P53618 B3GALNT1P1-201ENST00000420569 975 ntBASIC4.37□□□□□ -1.71
COPB1P53618 OFD1P18Y-201ENST00000420889 959 ntBASIC4.37□□□□□ -1.71
COPB1P53618 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC4.37□□□□□ -1.71
COPB1P53618 RPL37P21-201ENST00000435890 276 ntBASIC4.37□□□□□ -1.71
COPB1P53618 MTATP6P13-201ENST00000438531 667 ntBASIC4.37□□□□□ -1.71
COPB1P53618 HMGB1P37-201ENST00000439613 609 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AL022238.1-201ENST00000442557 355 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.37□□□□□ -1.71
COPB1P53618 RNU7-136P-201ENST00000458819 69 ntBASIC4.37□□□□□ -1.71
COPB1P53618 RPL38P1-201ENST00000460914 211 ntBASIC4.37□□□□□ -1.71
COPB1P53618 RPS15AP17-201ENST00000470598 390 ntBASIC4.37□□□□□ -1.71
COPB1P53618 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC4.37□□□□□ -1.71
COPB1P53618 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC4.37□□□□□ -1.71
COPB1P53618 AC027343.1-201ENST00000504765 407 ntTSL 4 BASIC4.37□□□□□ -1.71
COPB1P53618 AC021678.1-201ENST00000505195 936 ntBASIC4.37□□□□□ -1.71
COPB1P53618 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COPB1P53618 AC104986.1-201ENST00000517978 436 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC4.37□□□□□ -1.71
COPB1P53618 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC4.37□□□□□ -1.71
COPB1P53618 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC4.37□□□□□ -1.71
COPB1P53618 AC068446.3-201ENST00000555285 382 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC4.37□□□□□ -1.71
COPB1P53618 LARP7P2-201ENST00000575306 125 ntBASIC4.37□□□□□ -1.71
COPB1P53618 MIR3939-201ENST00000582614 106 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC4.37□□□□□ -1.71
COPB1P53618 LINC00907-208ENST00000593051 1092 ntTSL 1 (best) BASIC4.37□□□□□ -1.71
COPB1P53618 AC020914.4-201ENST00000597690 277 ntBASIC4.37□□□□□ -1.71
COPB1P53618 IPO5P1-202ENST00000600039 287 ntBASIC4.37□□□□□ -1.71
COPB1P53618 SEPT7P9-203ENST00000604116 343 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AC006566.1-201ENST00000608943 513 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AC116447.1-201ENST00000613153 453 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AC026368.1-201ENST00000614934 690 ntBASIC4.37□□□□□ -1.71
COPB1P53618 RDM1-219ENST00000615378 542 ntTSL 3 BASIC4.37□□□□□ -1.71
COPB1P53618 RNU6-156P-201ENST00000621869 107 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AC011944.2-201ENST00000624440 683 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AC099654.12-201ENST00000639868 649 ntBASIC4.37□□□□□ -1.71
COPB1P53618 OR52H1-202ENST00000641796 1061 ntBASIC4.37□□□□□ -1.71
COPB1P53618 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COPB1P53618 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.37□□□□□ -1.71
COPB1P53618 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC4.37□□□□□ -1.71
COPB1P53618 AL133412.1-201ENST00000380194 2992 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AL118496.1-201ENST00000440201 1812 ntBASIC4.37□□□□□ -1.71
COPB1P53618 AL445437.1-201ENST00000623157 3087 ntBASIC4.37□□□□□ -1.71
COPB1P53618 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.36□□□□□ -1.71
COPB1P53618 FAM35DP-201ENST00000323387 2712 ntBASIC4.36□□□□□ -1.71
COPB1P53618 MIR383-201ENST00000362257 73 ntBASIC4.36□□□□□ -1.71
COPB1P53618 RNU6-259P-201ENST00000383999 107 ntBASIC4.36□□□□□ -1.71
COPB1P53618 RNU6-1042P-201ENST00000384204 107 ntBASIC4.36□□□□□ -1.71
COPB1P53618 RNU11-4P-201ENST00000391149 133 ntBASIC4.36□□□□□ -1.71
COPB1P53618 ARF4P3-201ENST00000397387 509 ntBASIC4.36□□□□□ -1.71
COPB1P53618 RNU6ATAC25P-201ENST00000408798 117 ntBASIC4.36□□□□□ -1.71
COPB1P53618 SNX10-203ENST00000409367 746 ntTSL 5 BASIC4.36□□□□□ -1.71
COPB1P53618 HMGN1P14-201ENST00000412459 517 ntBASIC4.36□□□□□ -1.71
COPB1P53618 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC4.36□□□□□ -1.71
COPB1P53618 AC068599.1-201ENST00000422558 567 ntTSL 4 BASIC4.36□□□□□ -1.71
COPB1P53618 AL357375.1-201ENST00000424274 525 ntTSL 3 BASIC4.36□□□□□ -1.71
COPB1P53618 AP001136.1-201ENST00000425058 635 ntTSL 2 BASIC4.36□□□□□ -1.71
COPB1P53618 AL031736.2-201ENST00000426573 787 ntBASIC4.36□□□□□ -1.71
COPB1P53618 TRIM60P3Y-201ENST00000432201 673 ntBASIC4.36□□□□□ -1.71
COPB1P53618 GDI2P2-201ENST00000445131 608 ntBASIC4.36□□□□□ -1.71
COPB1P53618 AL500522.2-201ENST00000448562 343 ntBASIC4.36□□□□□ -1.71
Retrieved 100 of 98,524 protein–RNA pairs in 81.9 ms