Protein–RNA interactions for Protein: P51800

CLCNKA, Chloride channel protein ClC-Ka, humanhuman

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKAP51800 SCEL-AS1-201ENST00000456280 493 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCNKAP51800 TRBV26-201ENST00000456572 344 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 MEMO1P3-201ENST00000459811 302 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 RPL30P9-201ENST00000465586 330 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 PPIAP15-201ENST00000479662 484 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 TMEM251P1-201ENST00000503717 318 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 NPM1P41-201ENST00000512920 831 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 AC090833.1-201ENST00000513853 806 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCNKAP51800 AC104057.1-201ENST00000515547 497 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCNKAP51800 OR4R3P-201ENST00000525084 838 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCNKAP51800 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.88□□□□□ -1.79
CLCNKAP51800 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCNKAP51800 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.88□□□□□ -1.79
CLCNKAP51800 NDUFAF4P1-201ENST00000559425 519 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC3.88□□□□□ -1.79
CLCNKAP51800 MIR4637-201ENST00000582405 84 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCNKAP51800 AL391497.1-201ENST00000608671 547 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 AL354810.1-201ENST00000618134 635 ntTSL 3 BASIC3.88□□□□□ -1.79
CLCNKAP51800 AC018816.2-201ENST00000621460 353 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC3.88□□□□□ -1.79
CLCNKAP51800 U6.101-201ENST00000637707 76 ntBASIC3.88□□□□□ -1.79
CLCNKAP51800 NR3C1-202ENST00000343796 7286 ntAPPRIS P3 TSL 5 BASIC3.88□□□□□ -1.79
CLCNKAP51800 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
CLCNKAP51800 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCNKAP51800 TLR8-202ENST00000311912 3367 ntAPPRIS P4 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCNKAP51800 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
CLCNKAP51800 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLCNKAP51800 OR4G11P-202ENST00000642116 1414 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 EXOC5P1-201ENST00000510543 1969 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 ZNF382-203ENST00000435416 3865 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCNKAP51800 LINC00648-202ENST00000555985 2885 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCNKAP51800 SNORA31-201ENST00000362607 130 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
CLCNKAP51800 RPS3AP26-201ENST00000398259 784 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 SSXP10-201ENST00000402595 565 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AL138878.1-201ENST00000405131 347 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 ZNF736P2Y-201ENST00000416040 1279 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AL158834.1-201ENST00000419441 466 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCNKAP51800 CKS1BP5-201ENST00000434172 273 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AL451129.1-201ENST00000437471 285 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCNKAP51800 RPS29P7-201ENST00000439662 171 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AL360221.1-201ENST00000445989 335 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AP000936.2-201ENST00000447151 681 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 MTND1P29-201ENST00000448112 647 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 HMGN2P7-201ENST00000456186 273 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AC068724.1-201ENST00000487100 792 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AC106872.2-201ENST00000494303 480 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AP001086.1-201ENST00000494882 321 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC3.87□□□□□ -1.79
CLCNKAP51800 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC104986.1-201ENST00000517978 436 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC087369.1-201ENST00000520775 996 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 HIGD1AP10-201ENST00000527837 282 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AKAP7-208ENST00000537868 1006 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCNKAP51800 CYCSP30-201ENST00000546447 172 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AC007115.1-201ENST00000546853 234 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AC069228.1-202ENST00000550272 737 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC093012.1-201ENST00000552999 446 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC092378.2-202ENST00000569328 445 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC141257.3-201ENST00000572906 215 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AL157938.2-201ENST00000587264 894 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC3.87□□□□□ -1.79
CLCNKAP51800 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC146944.4-201ENST00000602697 718 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 U73023.1-201ENST00000603134 700 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AL109618.2-201ENST00000605527 211 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AL031775.1-201ENST00000607014 887 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AC106028.5-201ENST00000610332 395 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AL158063.1-201ENST00000615349 536 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AL591424.2-201ENST00000617023 128 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 AL354798.1-201ENST00000622505 329 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 TEX41-265ENST00000627785 704 ntTSL 5 BASIC3.87□□□□□ -1.79
CLCNKAP51800 AC127502.3-201ENST00000636170 1206 ntBASIC3.87□□□□□ -1.79
CLCNKAP51800 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCNKAP51800 MYSM1-203ENST00000472487 7785 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
CLCNKAP51800 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
CLCNKAP51800 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC3.87□□□□□ -1.79
CLCNKAP51800 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC3.86□□□□□ -1.79
CLCNKAP51800 ZNF962P-201ENST00000443465 3140 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 CPXCR1-202ENST00000373111 1577 ntAPPRIS P1 TSL 2 BASIC3.86□□□□□ -1.79
CLCNKAP51800 DOCK7-204ENST00000454575 6985 ntAPPRIS ALT2 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 AL133383.2-201ENST00000622958 2336 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 POLK-201ENST00000241436 5911 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
CLCNKAP51800 RNA5SP322-201ENST00000363617 119 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 Y_RNA.201-201ENST00000364052 96 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 SNORD6-201ENST00000365444 73 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.86□□□□□ -1.79
CLCNKAP51800 RPL32P23-201ENST00000397237 405 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 DHFRP6-201ENST00000401776 268 ntBASIC3.86□□□□□ -1.79
CLCNKAP51800 SNX10-203ENST00000409367 746 ntTSL 5 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms