Protein–RNA interactions for Protein: P51610

HCFC1, Host cell factor 1, humanhuman

Predictions only

Length 2,035 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1P51610 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCFC1P51610 SEC23A-202ENST00000537403 4215 ntTSL 2 BASIC3.17□□□□□ -1.9
HCFC1P51610 SNRPEP3-201ENST00000338402 276 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 Y_RNA.51-201ENST00000362725 102 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 SNORA4.1-201ENST00000364263 144 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 RNU6-444P-201ENST00000383988 108 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 SNORD17-201ENST00000390930 237 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 RPS3AP26-201ENST00000398259 784 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AL450338.1-201ENST00000407987 512 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 RNU4-72P-201ENST00000410754 173 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.17□□□□□ -1.9
HCFC1P51610 AC068058.1-201ENST00000435782 389 ntTSL 5 BASIC3.17□□□□□ -1.9
HCFC1P51610 MTND4P32-201ENST00000437189 1237 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC092641.1-201ENST00000440229 772 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.17□□□□□ -1.9
HCFC1P51610 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.17□□□□□ -1.9
HCFC1P51610 AC005912.1-201ENST00000495392 255 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC092045.1-201ENST00000495716 1231 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC147055.4-201ENST00000504399 745 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC3.17□□□□□ -1.9
HCFC1P51610 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC3.17□□□□□ -1.9
HCFC1P51610 AC112196.1-201ENST00000515092 832 ntTSL 3 BASIC3.17□□□□□ -1.9
HCFC1P51610 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.17□□□□□ -1.9
HCFC1P51610 AC095057.2-201ENST00000515422 553 ntTSL 4 BASIC3.17□□□□□ -1.9
HCFC1P51610 RNU6-1225P-201ENST00000516336 65 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 IGHV3-32-201ENST00000519182 355 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC087672.2-201ENST00000522498 429 ntTSL 2 BASIC3.17□□□□□ -1.9
HCFC1P51610 AC102945.1-201ENST00000522640 407 ntTSL 2 BASIC3.17□□□□□ -1.9
HCFC1P51610 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.17□□□□□ -1.9
HCFC1P51610 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC3.17□□□□□ -1.9
HCFC1P51610 AC093519.1-201ENST00000566109 298 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC009101.1-201ENST00000568135 242 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC106782.4-201ENST00000568264 210 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
HCFC1P51610 AC138207.6-203ENST00000581652 565 ntTSL 4 BASIC3.17□□□□□ -1.9
HCFC1P51610 MIR4999-201ENST00000585029 91 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.17□□□□□ -1.9
HCFC1P51610 VN1R79P-201ENST00000593540 513 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 KLKP1-201ENST00000595979 403 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.17□□□□□ -1.9
HCFC1P51610 BNIP3P11-201ENST00000603878 563 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AL163642.2-201ENST00000604722 1019 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC012557.2-201ENST00000605919 418 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AL139418.1-201ENST00000613613 177 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 U6.101-201ENST00000637707 76 ntBASIC3.17□□□□□ -1.9
HCFC1P51610 AC134980.1-211ENST00000638243 1094 ntTSL 2 BASIC3.17□□□□□ -1.9
HCFC1P51610 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.17□□□□□ -1.9
HCFC1P51610 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HCFC1P51610 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCFC1P51610 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HCFC1P51610 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCFC1P51610 SUCNR1-201ENST00000362032 4181 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCFC1P51610 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCFC1P51610 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC3.16□□□□□ -1.9
HCFC1P51610 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.16□□□□□ -1.9
HCFC1P51610 AC007685.1-201ENST00000329806 452 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 Y_RNA.318-201ENST00000365131 97 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 C1orf105-203ENST00000367727 985 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCFC1P51610 SNORA51.12-201ENST00000384448 134 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AL138878.1-201ENST00000405131 347 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AL136133.1-201ENST00000413694 376 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.16□□□□□ -1.9
HCFC1P51610 AC092634.6-201ENST00000418558 192 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 SEPT2P1-201ENST00000419651 180 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 SDCBPP2-201ENST00000424643 885 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.16□□□□□ -1.9
HCFC1P51610 AC002383.1-201ENST00000448260 671 ntTSL 5 BASIC3.16□□□□□ -1.9
HCFC1P51610 RPL23AP15-201ENST00000450202 459 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 BTF3P5-201ENST00000457252 467 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 RPL31P3-201ENST00000458430 332 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 LINC00971-203ENST00000491849 452 ntTSL 3 BASIC3.16□□□□□ -1.9
HCFC1P51610 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC3.16□□□□□ -1.9
HCFC1P51610 MTND1P22-201ENST00000510572 951 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 SUMO2P20-201ENST00000520803 283 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AC135001.1-201ENST00000544546 283 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AL355102.1-201ENST00000555383 460 ntTSL 5 BASIC3.16□□□□□ -1.9
HCFC1P51610 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AC074051.3-201ENST00000570238 358 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.16□□□□□ -1.9
HCFC1P51610 AL358072.1-201ENST00000604156 575 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AC121247.2-201ENST00000604776 136 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC3.16□□□□□ -1.9
HCFC1P51610 AC127502.3-201ENST00000636170 1206 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.16□□□□□ -1.9
HCFC1P51610 ZNF37BP-203ENST00000452306 1352 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 AL451142.2-201ENST00000429076 2090 ntBASIC3.16□□□□□ -1.9
HCFC1P51610 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCFC1P51610 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC3.16□□□□□ -1.9
HCFC1P51610 LLPH-201ENST00000266604 7746 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
HCFC1P51610 CCDC169-201ENST00000239859 708 ntAPPRIS P1 TSL 5 BASIC3.15□□□□□ -1.9
HCFC1P51610 RNU4-24P-201ENST00000364565 139 ntBASIC3.15□□□□□ -1.9
HCFC1P51610 RNU6-1293P-201ENST00000384077 107 ntBASIC3.15□□□□□ -1.9
HCFC1P51610 RNU6-1300P-201ENST00000391046 108 ntBASIC3.15□□□□□ -1.9
HCFC1P51610 AC009480.1-201ENST00000402410 412 ntTSL 3 BASIC3.15□□□□□ -1.9
HCFC1P51610 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.15□□□□□ -1.9
HCFC1P51610 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC3.15□□□□□ -1.9
HCFC1P51610 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC3.15□□□□□ -1.9
HCFC1P51610 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.15□□□□□ -1.9
HCFC1P51610 AL049610.1-201ENST00000423374 372 ntBASIC3.15□□□□□ -1.9
HCFC1P51610 AC093698.1-201ENST00000423843 571 ntBASIC3.15□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 95.7 ms