Protein–RNA interactions for Protein: P51587

BRCA2, Breast cancer type 2 susceptibility protein, humanhuman

Predictions only

Length 3,418 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA2P51587 RPS29P12-201ENST00000460178 152 ntBASIC2.34□□□□□ -2.03
BRCA2P51587 AC004263.1-201ENST00000479327 332 ntBASIC2.34□□□□□ -2.03
BRCA2P51587 RNA5SP61-201ENST00000516453 100 ntBASIC2.34□□□□□ -2.03
BRCA2P51587 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC2.34□□□□□ -2.03
BRCA2P51587 AL157911.1-202ENST00000554123 502 ntTSL 3 BASIC2.34□□□□□ -2.03
BRCA2P51587 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.34□□□□□ -2.04
BRCA2P51587 AC092991.1-201ENST00000477176 376 ntBASIC2.34□□□□□ -2.04
BRCA2P51587 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.34□□□□□ -2.04
BRCA2P51587 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC2.34□□□□□ -2.04
BRCA2P51587 AC004965.1-201ENST00000413033 213 ntBASIC2.33□□□□□ -2.04
BRCA2P51587 LINC02229-201ENST00000508486 661 ntTSL 3 BASIC2.33□□□□□ -2.04
BRCA2P51587 RN7SKP60-201ENST00000516985 239 ntBASIC2.33□□□□□ -2.04
BRCA2P51587 MIR5002-201ENST00000584713 97 ntBASIC2.33□□□□□ -2.04
BRCA2P51587 AP005901.5-201ENST00000545779 1796 ntBASIC2.33□□□□□ -2.04
BRCA2P51587 PRKD3-201ENST00000234179 5900 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
BRCA2P51587 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC2.33□□□□□ -2.04
BRCA2P51587 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC2.33□□□□□ -2.04
BRCA2P51587 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC2.33□□□□□ -2.04
BRCA2P51587 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.33□□□□□ -2.04
BRCA2P51587 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC2.33□□□□□ -2.04
BRCA2P51587 FRG1DP-201ENST00000635586 771 ntBASIC2.33□□□□□ -2.04
BRCA2P51587 AC005261.6-201ENST00000623072 1387 ntBASIC2.33□□□□□ -2.04
BRCA2P51587 FOXP2-206ENST00000393491 6085 ntTSL 5 BASIC2.33□□□□□ -2.04
BRCA2P51587 ABCA12-201ENST00000272895 9100 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
BRCA2P51587 AC090229.1-201ENST00000590983 1609 ntBASIC2.33□□□□□ -2.04
BRCA2P51587 DEFB106A-201ENST00000335186 303 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
BRCA2P51587 LPP-AS1-201ENST00000434996 494 ntTSL 3 BASIC2.33□□□□□ -2.04
BRCA2P51587 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.33□□□□□ -2.04
BRCA2P51587 AC017007.3-201ENST00000479865 435 ntBASIC2.33□□□□□ -2.04
BRCA2P51587 MIR6504-201ENST00000613520 61 ntBASIC2.33□□□□□ -2.04
BRCA2P51587 ANKRD30A-202ENST00000374660 4762 ntAPPRIS ALT2 TSL 5 BASIC2.33□□□□□ -2.04
BRCA2P51587 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC2.33□□□□□ -2.04
BRCA2P51587 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC2.33□□□□□ -2.04
BRCA2P51587 SIRT1-203ENST00000406900 3295 ntTSL 2 BASIC2.32□□□□□ -2.04
BRCA2P51587 AC002543.1-201ENST00000299783 1954 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.32□□□□□ -2.04
BRCA2P51587 MLLT10P2-201ENST00000506434 249 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 AC104002.1-201ENST00000557025 380 ntTSL 3 BASIC2.32□□□□□ -2.04
BRCA2P51587 AC022709.1-201ENST00000615967 87 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.32□□□□□ -2.04
BRCA2P51587 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC2.32□□□□□ -2.04
BRCA2P51587 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC2.32□□□□□ -2.04
BRCA2P51587 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC2.32□□□□□ -2.04
BRCA2P51587 AP002993.1-201ENST00000538624 210 ntTSL 5 BASIC2.32□□□□□ -2.04
BRCA2P51587 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC2.32□□□□□ -2.04
BRCA2P51587 CU459211.1-201ENST00000635667 749 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC2.32□□□□□ -2.04
BRCA2P51587 MTND4P10-201ENST00000446199 1363 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 MTND4P35-201ENST00000604257 1375 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 KTN1-207ENST00000438792 4449 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
BRCA2P51587 Y_RNA.327-201ENST00000365201 102 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.32□□□□□ -2.04
BRCA2P51587 AP1S3-208ENST00000446015 499 ntAPPRIS ALT1 TSL 1 (best) BASIC2.32□□□□□ -2.04
BRCA2P51587 AL024497.2-201ENST00000457081 317 ntTSL 3 BASIC2.32□□□□□ -2.04
BRCA2P51587 ALDH7A1P3-201ENST00000492517 345 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 OR52A4P-203ENST00000498233 1014 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC2.32□□□□□ -2.04
BRCA2P51587 BX664608.1-201ENST00000610519 487 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 AC006971.1-201ENST00000407916 4486 ntBASIC2.32□□□□□ -2.04
BRCA2P51587 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC2.32□□□□□ -2.04
BRCA2P51587 AL139811.1-201ENST00000424779 2299 ntBASIC2.31□□□□□ -2.04
BRCA2P51587 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.31□□□□□ -2.04
BRCA2P51587 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC2.31□□□□□ -2.04
BRCA2P51587 RNU6-356P-201ENST00000384140 107 ntBASIC2.31□□□□□ -2.04
BRCA2P51587 AL023807.1-201ENST00000407932 359 ntBASIC2.31□□□□□ -2.04
BRCA2P51587 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.31□□□□□ -2.04
BRCA2P51587 AC025281.1-201ENST00000567026 265 ntBASIC2.31□□□□□ -2.04
BRCA2P51587 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.31□□□□□ -2.04
BRCA2P51587 RC3H2-203ENST00000373670 9248 ntAPPRIS P1 TSL 5 BASIC2.31□□□□□ -2.04
BRCA2P51587 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC2.31□□□□□ -2.04
BRCA2P51587 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
BRCA2P51587 CHD9-221ENST00000615216 10603 ntTSL 5 BASIC2.31□□□□□ -2.04
BRCA2P51587 AC093908.1-201ENST00000623125 8092 ntBASIC2.31□□□□□ -2.04
BRCA2P51587 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
BRCA2P51587 RNA5SP129-201ENST00000410276 118 ntBASIC2.31□□□□□ -2.04
BRCA2P51587 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC2.31□□□□□ -2.04
BRCA2P51587 LINC02532-205ENST00000430094 628 ntTSL 5 BASIC2.31□□□□□ -2.04
BRCA2P51587 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
BRCA2P51587 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC2.31□□□□□ -2.04
BRCA2P51587 PRKG1-205ENST00000401604 5922 ntTSL 5 BASIC2.31□□□□□ -2.04
BRCA2P51587 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.31□□□□□ -2.04
BRCA2P51587 SNORD114-22-201ENST00000365423 72 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 OFD1P1Y-201ENST00000411756 1225 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
BRCA2P51587 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC2.3□□□□□ -2.04
BRCA2P51587 XKRY-201ENST00000510392 1100 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC2.3□□□□□ -2.04
BRCA2P51587 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.3□□□□□ -2.04
BRCA2P51587 LINC01206-214ENST00000610910 456 ntTSL 5 BASIC2.3□□□□□ -2.04
BRCA2P51587 KNTC1-201ENST00000333479 6975 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
BRCA2P51587 KMO-204ENST00000366559 5261 ntAPPRIS P2 TSL 1 (best) BASIC2.3□□□□□ -2.04
BRCA2P51587 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC2.3□□□□□ -2.04
BRCA2P51587 CHL1-216ENST00000620033 7311 ntTSL 1 (best) BASIC2.3□□□□□ -2.04
BRCA2P51587 AC026320.1-202ENST00000444729 672 ntTSL 3 BASIC2.3□□□□□ -2.04
BRCA2P51587 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.3□□□□□ -2.04
BRCA2P51587 MIR4255-201ENST00000579351 72 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 PVT1_3.1-201ENST00000620853 95 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 LCOR-205ENST00000421806 16004 ntTSL 3 BASIC2.3□□□□□ -2.04
BRCA2P51587 AC007342.7-201ENST00000624610 2337 ntBASIC2.3□□□□□ -2.04
BRCA2P51587 DTWD1-201ENST00000251250 13776 ntAPPRIS P1 TSL 1 (best) BASIC2.3□□□□□ -2.04
Retrieved 100 of 98,524 protein–RNA pairs in 118.4 ms