Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 RNU6-8-201ENST00000365467 107 ntBASIC2.42□□□□□ -2.02
SRP9P49458 AL121972.1-201ENST00000402023 252 ntBASIC2.42□□□□□ -2.02
SRP9P49458 GLS-203ENST00000409215 632 ntTSL 4 BASIC2.42□□□□□ -2.02
SRP9P49458 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP9P49458 B3GALNT1P1-201ENST00000420569 975 ntBASIC2.42□□□□□ -2.02
SRP9P49458 AL645937.1-202ENST00000421799 937 ntBASIC2.42□□□□□ -2.02
SRP9P49458 AL513175.2-201ENST00000422071 443 ntBASIC2.42□□□□□ -2.02
SRP9P49458 AL606495.1-201ENST00000422100 813 ntBASIC2.42□□□□□ -2.02
SRP9P49458 RPL7P44-201ENST00000424827 742 ntBASIC2.42□□□□□ -2.02
SRP9P49458 AC119800.1-201ENST00000429871 423 ntTSL 2 BASIC2.42□□□□□ -2.02
SRP9P49458 AC020743.3-201ENST00000440351 360 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP9P49458 ST13P20-201ENST00000447996 1065 ntBASIC2.42□□□□□ -2.02
SRP9P49458 GAS5-221ENST00000450589 632 ntTSL 1 (best) BASIC2.42□□□□□ -2.02
SRP9P49458 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP9P49458 KC877373.1-201ENST00000479066 408 ntBASIC2.42□□□□□ -2.02
SRP9P49458 RPS3AP14-201ENST00000483907 780 ntBASIC2.42□□□□□ -2.02
SRP9P49458 LINC02110-201ENST00000503870 546 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP9P49458 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.42□□□□□ -2.02
SRP9P49458 AC016550.3-201ENST00000515706 767 ntBASIC2.42□□□□□ -2.02
SRP9P49458 RNU6-1308P-201ENST00000516817 103 ntBASIC2.42□□□□□ -2.02
SRP9P49458 AC021736.1-201ENST00000521143 563 ntTSL 4 BASIC2.42□□□□□ -2.02
SRP9P49458 RGS4-207ENST00000527809 817 ntTSL 4 BASIC2.42□□□□□ -2.02
SRP9P49458 AC021979.1-201ENST00000553822 336 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP9P49458 AL355836.1-201ENST00000555951 870 ntBASIC2.42□□□□□ -2.02
SRP9P49458 MIR4446-201ENST00000578505 67 ntBASIC2.42□□□□□ -2.02
SRP9P49458 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC2.42□□□□□ -2.02
SRP9P49458 AL160281.1-201ENST00000605307 311 ntBASIC2.42□□□□□ -2.02
SRP9P49458 AC024560.3-201ENST00000608482 349 ntBASIC2.42□□□□□ -2.02
SRP9P49458 AL034549.1-201ENST00000615120 578 ntTSL 2 BASIC2.42□□□□□ -2.02
SRP9P49458 CR381653.2-201ENST00000624041 768 ntBASIC2.42□□□□□ -2.02
SRP9P49458 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC2.42□□□□□ -2.02
SRP9P49458 ZNF37BP-203ENST00000452306 1352 ntBASIC2.41□□□□□ -2.02
SRP9P49458 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRP9P49458 TRAJ26-201ENST00000390511 60 ntAPPRIS P1 BASIC2.41□□□□□ -2.02
SRP9P49458 AC234782.4-201ENST00000417646 1048 ntBASIC2.41□□□□□ -2.02
SRP9P49458 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 UBE2D3P2-201ENST00000424409 445 ntBASIC2.41□□□□□ -2.02
SRP9P49458 AL591475.1-201ENST00000429060 489 ntTSL 2 BASIC2.41□□□□□ -2.02
SRP9P49458 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2.41□□□□□ -2.02
SRP9P49458 AL139132.1-201ENST00000431587 344 ntBASIC2.41□□□□□ -2.02
SRP9P49458 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 AC026167.1-201ENST00000435651 299 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 AL109741.2-201ENST00000455561 343 ntBASIC2.41□□□□□ -2.02
SRP9P49458 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC2.41□□□□□ -2.02
SRP9P49458 AC092834.1-201ENST00000506514 442 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 AC008565.1-201ENST00000509046 885 ntBASIC2.41□□□□□ -2.02
SRP9P49458 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 AC139720.2-201ENST00000514766 440 ntTSL 2 BASIC2.41□□□□□ -2.02
SRP9P49458 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 RNA5SP367-201ENST00000516557 118 ntBASIC2.41□□□□□ -2.02
SRP9P49458 RN7SKP40-201ENST00000517211 242 ntBASIC2.41□□□□□ -2.02
SRP9P49458 HMGB1P41-201ENST00000520234 440 ntBASIC2.41□□□□□ -2.02
SRP9P49458 AC010306.1-201ENST00000523223 1117 ntBASIC2.41□□□□□ -2.02
SRP9P49458 SPINK7-205ENST00000523535 299 ntTSL 2 BASIC2.41□□□□□ -2.02
SRP9P49458 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC2.41□□□□□ -2.02
SRP9P49458 APAF1-207ENST00000547743 651 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 AC074029.1-201ENST00000552531 1044 ntBASIC2.41□□□□□ -2.02
SRP9P49458 AC127024.3-201ENST00000582841 460 ntTSL 3 BASIC2.41□□□□□ -2.02
SRP9P49458 MIR3605-201ENST00000583214 100 ntBASIC2.41□□□□□ -2.02
SRP9P49458 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC2.41□□□□□ -2.02
SRP9P49458 AL160237.3-201ENST00000604114 1013 ntBASIC2.41□□□□□ -2.02
SRP9P49458 AL513314.2-206ENST00000617276 434 ntTSL 5 BASIC2.41□□□□□ -2.02
SRP9P49458 AC004943.1-201ENST00000620814 561 ntTSL 5 BASIC2.41□□□□□ -2.02
SRP9P49458 AL137790.1-201ENST00000634283 177 ntBASIC2.41□□□□□ -2.02
SRP9P49458 OFD1P6Y-202ENST00000451061 2724 ntBASIC2.41□□□□□ -2.02
SRP9P49458 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRP9P49458 ZNF567-201ENST00000360729 2691 ntTSL 1 (best) BASIC2.41□□□□□ -2.02
SRP9P49458 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRP9P49458 PHF11-215ENST00000488958 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC2.41□□□□□ -2.02
SRP9P49458 ZNF626-204ENST00000612591 4404 ntAPPRIS P1 TSL 5 BASIC2.4□□□□□ -2.03
SRP9P49458 MIR26A1-201ENST00000362205 77 ntBASIC2.4□□□□□ -2.03
SRP9P49458 RNA5SP139-201ENST00000364340 117 ntBASIC2.4□□□□□ -2.03
SRP9P49458 EIF4EBP2P3-201ENST00000403144 334 ntBASIC2.4□□□□□ -2.03
SRP9P49458 MIR1250-201ENST00000408098 113 ntBASIC2.4□□□□□ -2.03
SRP9P49458 COTL1P1-201ENST00000422309 375 ntBASIC2.4□□□□□ -2.03
SRP9P49458 UBE2V1P6-201ENST00000430840 422 ntBASIC2.4□□□□□ -2.03
SRP9P49458 AC093083.1-201ENST00000438633 347 ntTSL 3 BASIC2.4□□□□□ -2.03
SRP9P49458 MED6P1-201ENST00000439659 713 ntBASIC2.4□□□□□ -2.03
SRP9P49458 LINC02041-201ENST00000440726 246 ntTSL 5 BASIC2.4□□□□□ -2.03
SRP9P49458 RPS24P13-201ENST00000442520 397 ntBASIC2.4□□□□□ -2.03
SRP9P49458 AL118523.1-201ENST00000444436 480 ntTSL 3 BASIC2.4□□□□□ -2.03
SRP9P49458 LINC00440-201ENST00000446579 734 ntTSL 5 BASIC2.4□□□□□ -2.03
SRP9P49458 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC2.4□□□□□ -2.03
SRP9P49458 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC2.4□□□□□ -2.03
SRP9P49458 AC080014.1-201ENST00000496877 1201 ntBASIC2.4□□□□□ -2.03
SRP9P49458 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SRP9P49458 MTND3P24-201ENST00000506306 329 ntBASIC2.4□□□□□ -2.03
SRP9P49458 AC113398.2-201ENST00000507630 558 ntBASIC2.4□□□□□ -2.03
SRP9P49458 AC090136.1-201ENST00000520009 240 ntBASIC2.4□□□□□ -2.03
SRP9P49458 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC2.4□□□□□ -2.03
SRP9P49458 AP003385.6-201ENST00000531603 374 ntBASIC2.4□□□□□ -2.03
SRP9P49458 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC2.4□□□□□ -2.03
SRP9P49458 CR383656.14-201ENST00000551951 406 ntBASIC2.4□□□□□ -2.03
SRP9P49458 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.4□□□□□ -2.03
SRP9P49458 CASC16-202ENST00000563844 610 ntTSL 3 BASIC2.4□□□□□ -2.03
SRP9P49458 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.4□□□□□ -2.03
SRP9P49458 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC2.4□□□□□ -2.03
SRP9P49458 AC008537.2-201ENST00000596135 482 ntTSL 3 BASIC2.4□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms