Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MIR5047-201ENST00000579212 100 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AC022069.1-201ENST00000582910 658 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AC022146.1-201ENST00000595307 847 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 VN1R88P-201ENST00000596787 292 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AL590282.1-201ENST00000610379 1136 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.09□□□□□ -1.91
TNFSF9P41273 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AL355578.1-201ENST00000607405 1328 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
TNFSF9P41273 AC138915.3-201ENST00000562908 1389 ntBASIC3.09□□□□□ -1.92
TNFSF9P41273 SAGE4P-201ENST00000442271 3381 ntBASIC3.09□□□□□ -1.92
TNFSF9P41273 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AL353746.1-201ENST00000566293 6881 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 RNU6-441P-201ENST00000384545 106 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 UBE2V1P2-201ENST00000397758 440 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 SFR1P1-201ENST00000403720 688 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 RNA5SP129-201ENST00000410276 118 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.08□□□□□ -1.92
TNFSF9P41273 RPS20P5-201ENST00000434808 360 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC000041.1-201ENST00000439655 175 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 SLC31A1P1-201ENST00000451221 567 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 NECAP1P2-201ENST00000455668 727 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC010285.1-201ENST00000470580 392 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFSF9P41273 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFSF9P41273 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFSF9P41273 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.08□□□□□ -1.92
TNFSF9P41273 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 SNORA76.2-201ENST00000517095 137 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC107016.2-201ENST00000547968 190 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFSF9P41273 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFSF9P41273 AC006023.1-201ENST00000603944 259 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC013468.1-201ENST00000608680 598 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC245100.7-201ENST00000609678 442 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AL355493.4-201ENST00000618530 292 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 MTND4P21-201ENST00000453886 1357 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC025263.3-201ENST00000622965 1396 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 OR5J1P-201ENST00000313544 939 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 RNU6-77P-201ENST00000410554 91 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 OFD1P18Y-201ENST00000420889 959 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AL645937.1-202ENST00000421799 937 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.07□□□□□ -1.92
TNFSF9P41273 AC096632.1-201ENST00000427395 310 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 snoU13.3-201ENST00000459441 104 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 HMGB1P22-201ENST00000505315 124 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 MTCO3P44-201ENST00000510977 541 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
TNFSF9P41273 RNA5SP367-201ENST00000516557 118 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 RNU6-362P-201ENST00000516736 90 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 SNORA31.20-201ENST00000517111 133 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AP003385.6-201ENST00000531603 374 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 PDCL2P2-201ENST00000533651 189 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFSF9P41273 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 AC104229.1-201ENST00000561364 255 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AL731537.2-201ENST00000561565 951 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC106734.1-201ENST00000568646 663 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC023824.3-201ENST00000569003 562 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFSF9P41273 AL669831.4-202ENST00000590817 238 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC016542.1-201ENST00000608259 493 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFSF9P41273 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 GABRG2-229ENST00000641017 3628 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 SNORD56.4-201ENST00000363883 71 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFSF9P41273 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
TNFSF9P41273 MIR181A2-201ENST00000384863 110 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 MIR512-1-201ENST00000384913 84 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AL445183.3-201ENST00000414168 502 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AC008173.1-201ENST00000418901 264 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 RPP40P1-201ENST00000426762 456 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 ARF4P2-201ENST00000430209 526 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 10.6 ms