Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 MIR5047-201ENST00000579212 100 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AC022069.1-201ENST00000582910 658 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AC022146.1-201ENST00000595307 847 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 VN1R88P-201ENST00000596787 292 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 AL590282.1-201ENST00000610379 1136 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 CC2D2B-209ENST00000618242 980 ntTSL 5 BASIC3.09□□□□□ -1.91
TNFSF9P41273 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.09□□□□□ -1.91
TNFSF9P41273 AL355578.1-201ENST00000607405 1328 ntBASIC3.09□□□□□ -1.91
TNFSF9P41273 ISPD-AS1-202ENST00000438573 2252 ntTSL 1 (best) BASIC3.09□□□□□ -1.92
TNFSF9P41273 AC138915.3-201ENST00000562908 1389 ntBASIC3.09□□□□□ -1.92
TNFSF9P41273 SAGE4P-201ENST00000442271 3381 ntBASIC3.09□□□□□ -1.92
TNFSF9P41273 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 HSP90AA4P-202ENST00000506915 2228 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AL353746.1-201ENST00000566293 6881 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 RNU6-441P-201ENST00000384545 106 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 UBE2V1P2-201ENST00000397758 440 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 SFR1P1-201ENST00000403720 688 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 RNA5SP129-201ENST00000410276 118 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AL683807.1-202ENST00000432272 382 ntTSL 2 BASIC3.08□□□□□ -1.92
TNFSF9P41273 RPS20P5-201ENST00000434808 360 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC000041.1-201ENST00000439655 175 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 SLC31A1P1-201ENST00000451221 567 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 NECAP1P2-201ENST00000455668 727 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC010285.1-201ENST00000470580 392 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFSF9P41273 AC021491.3-201ENST00000513378 156 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFSF9P41273 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFSF9P41273 AC010280.3-201ENST00000515504 587 ntTSL 4 BASIC3.08□□□□□ -1.92
TNFSF9P41273 RNU4ATAC15P-201ENST00000516415 126 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 SNORA76.2-201ENST00000517095 137 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC107016.2-201ENST00000547968 190 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC027514.2-201ENST00000591014 637 ntTSL 3 BASIC3.08□□□□□ -1.92
TNFSF9P41273 AC008764.5-201ENST00000597851 190 ntTSL 5 BASIC3.08□□□□□ -1.92
TNFSF9P41273 AC006023.1-201ENST00000603944 259 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC013468.1-201ENST00000608680 598 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC245100.7-201ENST00000609678 442 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 5S_rRNA.12-201ENST00000617631 107 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AL355493.4-201ENST00000618530 292 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 EPS15-202ENST00000371730 4736 ntAPPRIS ALT2 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 MTND4P21-201ENST00000453886 1357 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 AC025263.3-201ENST00000622965 1396 ntBASIC3.08□□□□□ -1.92
TNFSF9P41273 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
TNFSF9P41273 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 OR5J1P-201ENST00000313544 939 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 RNU6-77P-201ENST00000410554 91 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 RN7SKP58-201ENST00000411010 305 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 OFD1P18Y-201ENST00000420889 959 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AL645937.1-202ENST00000421799 937 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.07□□□□□ -1.92
TNFSF9P41273 AC096632.1-201ENST00000427395 310 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 MIR4435-2HG-206ENST00000432818 572 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 RAB6C-AS1-202ENST00000433431 123 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 snoU13.3-201ENST00000459441 104 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 FAM104B-204ENST00000472571 1109 ntAPPRIS ALT2 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 AP004217.1-201ENST00000480579 346 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 HMGB1P22-201ENST00000505315 124 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 MTCO3P44-201ENST00000510977 541 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC113385.1-201ENST00000511468 563 ntTSL 4 BASIC3.07□□□□□ -1.92
TNFSF9P41273 RNA5SP367-201ENST00000516557 118 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 RNU6-362P-201ENST00000516736 90 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 SNORA31.20-201ENST00000517111 133 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AP003385.6-201ENST00000531603 374 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 PDCL2P2-201ENST00000533651 189 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.07□□□□□ -1.92
TNFSF9P41273 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 AC104229.1-201ENST00000561364 255 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AL731537.2-201ENST00000561565 951 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC106734.1-201ENST00000568646 663 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC023824.3-201ENST00000569003 562 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC135178.3-204ENST00000585181 451 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFSF9P41273 AL669831.4-202ENST00000590817 238 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 AC016542.1-201ENST00000608259 493 ntBASIC3.07□□□□□ -1.92
TNFSF9P41273 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 MYOT-208ENST00000515645 1578 ntTSL 2 BASIC3.07□□□□□ -1.92
TNFSF9P41273 GABRG2-215ENST00000639213 9960 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC3.07□□□□□ -1.92
TNFSF9P41273 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 EIF2A-201ENST00000273435 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC3.07□□□□□ -1.92
TNFSF9P41273 GABRG2-229ENST00000641017 3628 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 GNAI3-201ENST00000369851 27174 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 SNORD56.4-201ENST00000363883 71 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.06□□□□□ -1.92
TNFSF9P41273 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.06□□□□□ -1.92
TNFSF9P41273 MIR181A2-201ENST00000384863 110 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 MIR512-1-201ENST00000384913 84 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
TNFSF9P41273 OFD1P1Y-201ENST00000411756 1225 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AL445183.3-201ENST00000414168 502 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 TRBV24OR9-2-201ENST00000416632 435 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 AC008173.1-201ENST00000418901 264 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 RPP40P1-201ENST00000426762 456 ntBASIC3.06□□□□□ -1.92
TNFSF9P41273 ARF4P2-201ENST00000430209 526 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 113.1 ms