Protein–RNA interactions for Protein: P41225

SOX3, Transcription factor SOX-3, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SOX3P41225 VN1R92P-201ENST00000598511 928 ntBASIC3.44□□□□□ -1.86
SOX3P41225 AC006539.2-201ENST00000601729 572 ntBASIC3.44□□□□□ -1.86
SOX3P41225 AL009028.1-201ENST00000604895 802 ntBASIC3.44□□□□□ -1.86
SOX3P41225 AL133507.1-201ENST00000605269 557 ntBASIC3.44□□□□□ -1.86
SOX3P41225 AL513477.2-201ENST00000607858 568 ntBASIC3.44□□□□□ -1.86
SOX3P41225 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.44□□□□□ -1.86
SOX3P41225 RNVU1-4-201ENST00000612985 164 ntBASIC3.44□□□□□ -1.86
SOX3P41225 AL392048.1-201ENST00000613946 534 ntBASIC3.44□□□□□ -1.86
SOX3P41225 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.44□□□□□ -1.86
SOX3P41225 TTN-AS1-267ENST00000628826 662 ntTSL 5 BASIC3.44□□□□□ -1.86
SOX3P41225 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.44□□□□□ -1.86
SOX3P41225 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.44□□□□□ -1.86
SOX3P41225 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX3P41225 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
SOX3P41225 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.44□□□□□ -1.86
SOX3P41225 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.44□□□□□ -1.86
SOX3P41225 GALNT1-201ENST00000269195 3847 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX3P41225 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 CEP170P1-201ENST00000502249 4587 ntBASIC3.43□□□□□ -1.86
SOX3P41225 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SOX3P41225 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX3P41225 OR5H2-201ENST00000355273 945 ntBASIC3.43□□□□□ -1.86
SOX3P41225 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC3.43□□□□□ -1.86
SOX3P41225 RNU6-283P-201ENST00000364788 107 ntBASIC3.43□□□□□ -1.86
SOX3P41225 SNORA73.2-201ENST00000364946 201 ntBASIC3.43□□□□□ -1.86
SOX3P41225 C20orf187-201ENST00000378252 446 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX3P41225 RNU6-730P-201ENST00000383954 104 ntBASIC3.43□□□□□ -1.86
SOX3P41225 MIR670-201ENST00000390142 98 ntBASIC3.43□□□□□ -1.86
SOX3P41225 RNA5SP424-201ENST00000390988 115 ntBASIC3.43□□□□□ -1.86
SOX3P41225 CASP3-203ENST00000393588 677 ntTSL 4 BASIC3.43□□□□□ -1.86
SOX3P41225 AL590084.2-201ENST00000401481 382 ntBASIC3.43□□□□□ -1.86
SOX3P41225 RNU4-72P-201ENST00000410754 173 ntBASIC3.43□□□□□ -1.86
SOX3P41225 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX3P41225 TEX41-202ENST00000414256 604 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 LINC01427-201ENST00000420928 504 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SOX3P41225 EDNRB-AS1-201ENST00000422405 601 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 AL022400.1-201ENST00000423946 935 ntBASIC3.43□□□□□ -1.86
SOX3P41225 TXNL1P1-201ENST00000429528 554 ntBASIC3.43□□□□□ -1.86
SOX3P41225 OR6K5P-201ENST00000447050 945 ntBASIC3.43□□□□□ -1.86
SOX3P41225 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX3P41225 USP9YP10-201ENST00000454868 628 ntBASIC3.43□□□□□ -1.86
SOX3P41225 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 C1orf185-202ENST00000467127 747 ntAPPRIS ALT2 TSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 RPS15AP17-201ENST00000470598 390 ntBASIC3.43□□□□□ -1.86
SOX3P41225 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SOX3P41225 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX3P41225 AC093281.2-201ENST00000510153 597 ntBASIC3.43□□□□□ -1.86
SOX3P41225 USP9YP5-201ENST00000511770 630 ntBASIC3.43□□□□□ -1.86
SOX3P41225 AC068672.1-201ENST00000520391 328 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 AC008489.1-201ENST00000524271 483 ntBASIC3.43□□□□□ -1.86
SOX3P41225 AC007834.2-201ENST00000536310 343 ntBASIC3.43□□□□□ -1.86
SOX3P41225 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX3P41225 OSBPL9P5-201ENST00000542581 171 ntBASIC3.43□□□□□ -1.86
SOX3P41225 AC091515.1-201ENST00000548110 679 ntBASIC3.43□□□□□ -1.86
SOX3P41225 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.43□□□□□ -1.86
SOX3P41225 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 AC011461.1-201ENST00000592671 357 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.43□□□□□ -1.86
SOX3P41225 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC3.43□□□□□ -1.86
SOX3P41225 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 RNU1-30P-201ENST00000606575 163 ntBASIC3.43□□□□□ -1.86
SOX3P41225 AL159169.3-201ENST00000608871 561 ntBASIC3.43□□□□□ -1.86
SOX3P41225 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 AL607023.1-201ENST00000620045 248 ntBASIC3.43□□□□□ -1.86
SOX3P41225 AP000676.3-201ENST00000623299 569 ntBASIC3.43□□□□□ -1.86
SOX3P41225 AC231657.1-201ENST00000624313 397 ntBASIC3.43□□□□□ -1.86
SOX3P41225 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.43□□□□□ -1.86
SOX3P41225 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX3P41225 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.43□□□□□ -1.86
SOX3P41225 PABPC1P7-201ENST00000413177 1513 ntBASIC3.43□□□□□ -1.86
SOX3P41225 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
SOX3P41225 GDI2P1-201ENST00000429312 1336 ntBASIC3.43□□□□□ -1.86
SOX3P41225 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SOX3P41225 NMD3P1-201ENST00000439704 1488 ntBASIC3.42□□□□□ -1.86
SOX3P41225 PSMA5-201ENST00000271308 3729 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX3P41225 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.42□□□□□ -1.86
SOX3P41225 AL161912.2-201ENST00000565707 3007 ntBASIC3.42□□□□□ -1.86
SOX3P41225 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.42□□□□□ -1.86
SOX3P41225 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.42□□□□□ -1.86
SOX3P41225 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX3P41225 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC3.42□□□□□ -1.86
SOX3P41225 U3.15-201ENST00000365398 212 ntBASIC3.42□□□□□ -1.86
SOX3P41225 SNORD116-8-201ENST00000384365 95 ntBASIC3.42□□□□□ -1.86
SOX3P41225 MIR184-201ENST00000384962 84 ntBASIC3.42□□□□□ -1.86
SOX3P41225 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.42□□□□□ -1.86
SOX3P41225 HMGB1P17-201ENST00000403495 628 ntBASIC3.42□□□□□ -1.86
SOX3P41225 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.42□□□□□ -1.86
SOX3P41225 RPL31P45-201ENST00000419532 356 ntBASIC3.42□□□□□ -1.86
SOX3P41225 MTND2P18-201ENST00000419962 1030 ntBASIC3.42□□□□□ -1.86
SOX3P41225 AL953862.1-201ENST00000423016 168 ntBASIC3.42□□□□□ -1.86
SOX3P41225 AL035407.1-201ENST00000429211 571 ntBASIC3.42□□□□□ -1.86
Retrieved 100 of 98,524 protein–RNA pairs in 114.6 ms