Protein–RNA interactions for Protein: P41002

CCNF, Cyclin-F, humanhuman

Predictions only

Length 786 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNFP41002 GRIK2-201ENST00000318991 4317 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNFP41002 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
CCNFP41002 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNFP41002 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNFP41002 Y_RNA.138-201ENST00000363462 102 ntBASIC5.19□□□□□ -1.58
CCNFP41002 RNU4-20P-201ENST00000365601 151 ntBASIC5.19□□□□□ -1.58
CCNFP41002 SNORA67-201ENST00000384423 137 ntBASIC5.19□□□□□ -1.58
CCNFP41002 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCNFP41002 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC5.19□□□□□ -1.58
CCNFP41002 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.19□□□□□ -1.58
CCNFP41002 AL359643.1-201ENST00000404109 423 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AL356967.1-201ENST00000406305 431 ntBASIC5.19□□□□□ -1.58
CCNFP41002 MIR1271-201ENST00000408537 86 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC5.19□□□□□ -1.58
CCNFP41002 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNFP41002 NCOR1P3-201ENST00000420479 303 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AL353729.1-201ENST00000425044 720 ntBASIC5.19□□□□□ -1.58
CCNFP41002 SAR1AP4-201ENST00000429225 591 ntBASIC5.19□□□□□ -1.58
CCNFP41002 PSMA2P3-201ENST00000429685 675 ntBASIC5.19□□□□□ -1.58
CCNFP41002 EZH2P1-201ENST00000431167 291 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AL161722.2-201ENST00000434731 981 ntBASIC5.19□□□□□ -1.58
CCNFP41002 NDUFA5P4-201ENST00000436704 385 ntBASIC5.19□□□□□ -1.58
CCNFP41002 IGHV5-78-201ENST00000450948 295 ntBASIC5.19□□□□□ -1.58
CCNFP41002 SNORD121B-201ENST00000458838 81 ntBASIC5.19□□□□□ -1.58
CCNFP41002 RNU7-182P-201ENST00000459009 62 ntBASIC5.19□□□□□ -1.58
CCNFP41002 RNU7-59P-201ENST00000459101 61 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC5.19□□□□□ -1.58
CCNFP41002 AC116562.3-201ENST00000506136 177 ntBASIC5.19□□□□□ -1.58
CCNFP41002 MTCO3P44-201ENST00000510977 541 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AC005798.1-201ENST00000513715 387 ntBASIC5.19□□□□□ -1.58
CCNFP41002 RNU4ATAC8P-201ENST00000516196 109 ntBASIC5.19□□□□□ -1.58
CCNFP41002 RNU2-10P-201ENST00000516375 211 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AC068587.5-201ENST00000528506 175 ntBASIC5.19□□□□□ -1.58
CCNFP41002 DEFB130C-201ENST00000528518 237 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
CCNFP41002 AP000857.1-201ENST00000532151 543 ntBASIC5.19□□□□□ -1.58
CCNFP41002 OR5BN1P-201ENST00000532955 829 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AC090022.1-201ENST00000546569 311 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNFP41002 PSMA3P-201ENST00000555485 635 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNFP41002 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNFP41002 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNFP41002 AC103710.3-201ENST00000608157 948 ntBASIC5.19□□□□□ -1.58
CCNFP41002 C2orf27A-204ENST00000623058 969 ntBASIC5.19□□□□□ -1.58
CCNFP41002 AC091925.2-201ENST00000625059 256 ntBASIC5.19□□□□□ -1.58
CCNFP41002 LAMTOR5-AS1-244ENST00000629484 780 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNFP41002 SEPT14P19-202ENST00000632397 370 ntTSL 3 BASIC5.19□□□□□ -1.58
CCNFP41002 ATM-228ENST00000639240 498 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNFP41002 ATM-230ENST00000640388 578 ntTSL 5 BASIC5.19□□□□□ -1.58
CCNFP41002 AC008079.2-201ENST00000623543 20396 ntBASIC5.19□□□□□ -1.58
CCNFP41002 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNFP41002 ZNF736P3Y-201ENST00000428264 1465 ntBASIC5.19□□□□□ -1.58
CCNFP41002 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNFP41002 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
CCNFP41002 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNFP41002 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNFP41002 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNFP41002 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNFP41002 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC5.18□□□□□ -1.58
CCNFP41002 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC5.18□□□□□ -1.58
CCNFP41002 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC5.18□□□□□ -1.58
CCNFP41002 AL158835.1-203ENST00000415305 3149 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNFP41002 OR6B1-202ENST00000641698 5153 ntAPPRIS P1 BASIC5.18□□□□□ -1.58
CCNFP41002 AL359893.1-201ENST00000447628 1580 ntBASIC5.18□□□□□ -1.58
CCNFP41002 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC5.18□□□□□ -1.58
CCNFP41002 MTUS1-203ENST00000381861 3996 ntAPPRIS P4 TSL 2 BASIC5.18□□□□□ -1.58
CCNFP41002 RNA5SP183-201ENST00000362452 119 ntBASIC5.18□□□□□ -1.58
CCNFP41002 RN7SKP162-201ENST00000363605 345 ntBASIC5.18□□□□□ -1.58
CCNFP41002 MIR105-1-201ENST00000385222 81 ntBASIC5.18□□□□□ -1.58
CCNFP41002 U3.29-201ENST00000391296 212 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AL035079.1-201ENST00000405210 287 ntBASIC5.18□□□□□ -1.58
CCNFP41002 MIR1250-201ENST00000408098 113 ntBASIC5.18□□□□□ -1.58
CCNFP41002 RNA5SP296-201ENST00000410523 111 ntBASIC5.18□□□□□ -1.58
CCNFP41002 RNU2-39P-201ENST00000410604 198 ntBASIC5.18□□□□□ -1.58
CCNFP41002 RNU6-193P-201ENST00000410977 107 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AL645937.1-202ENST00000421799 937 ntBASIC5.18□□□□□ -1.58
CCNFP41002 MED13P1-201ENST00000428342 171 ntBASIC5.18□□□□□ -1.58
CCNFP41002 CFL1P1-202ENST00000432948 411 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AC236972.2-201ENST00000434979 310 ntBASIC5.18□□□□□ -1.58
CCNFP41002 RNU6-329P-201ENST00000459618 107 ntBASIC5.18□□□□□ -1.58
CCNFP41002 RPL37P6-202ENST00000464216 403 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AC121764.1-201ENST00000472238 563 ntTSL 4 BASIC5.18□□□□□ -1.58
CCNFP41002 RN7SL177P-201ENST00000476596 299 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC5.18□□□□□ -1.58
CCNFP41002 UBA52P7-201ENST00000486088 380 ntBASIC5.18□□□□□ -1.58
CCNFP41002 ATP6V1G3-204ENST00000489986 449 ntTSL 1 (best) BASIC5.18□□□□□ -1.58
CCNFP41002 AC073073.1-201ENST00000493920 463 ntBASIC5.18□□□□□ -1.58
CCNFP41002 ENSA-211ENST00000503345 793 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNFP41002 AC092542.1-201ENST00000513155 355 ntTSL 2 BASIC5.18□□□□□ -1.58
CCNFP41002 RN7SKP256-201ENST00000517201 314 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AC027308.1-201ENST00000517993 110 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AP005597.4-201ENST00000526762 229 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AC068446.3-201ENST00000555285 382 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AL161713.1-201ENST00000555538 145 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNFP41002 AC011939.2-201ENST00000567396 428 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNFP41002 RPL26-207ENST00000583011 524 ntAPPRIS P1 TSL 3 BASIC5.18□□□□□ -1.58
CCNFP41002 RN7SL435P-201ENST00000584418 282 ntBASIC5.18□□□□□ -1.58
CCNFP41002 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC5.18□□□□□ -1.58
CCNFP41002 FKBP1AP1-201ENST00000594588 318 ntBASIC5.18□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 82.6 ms