Protein–RNA interactions for Protein: P39905

GDNF, Glial cell line-derived neurotrophic factor, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDNFP39905 AL136372.1-201ENST00000403060 228 ntBASIC4.83□□□□□ -1.64
GDNFP39905 RNU6-1050P-201ENST00000410388 107 ntBASIC4.83□□□□□ -1.64
GDNFP39905 RNU2-64P-201ENST00000411315 191 ntBASIC4.83□□□□□ -1.64
GDNFP39905 HMGN1P24-201ENST00000412282 298 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AC025946.1-201ENST00000413286 430 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 E2F6P2-201ENST00000420708 748 ntBASIC4.83□□□□□ -1.64
GDNFP39905 EIF4EP1-201ENST00000422311 642 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AL109947.1-201ENST00000423747 382 ntTSL 2 BASIC4.83□□□□□ -1.64
GDNFP39905 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 AL161722.2-201ENST00000434731 981 ntBASIC4.83□□□□□ -1.64
GDNFP39905 NXT1P1-201ENST00000458481 316 ntBASIC4.83□□□□□ -1.64
GDNFP39905 RN7SL188P-201ENST00000469842 285 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AC087879.1-201ENST00000474343 374 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AC092865.4-201ENST00000477936 615 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AC116337.1-201ENST00000509680 687 ntBASIC4.83□□□□□ -1.64
GDNFP39905 HIGD1AP13-201ENST00000509878 289 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AC008592.4-201ENST00000509999 450 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 TBCAP3-201ENST00000512475 312 ntBASIC4.83□□□□□ -1.64
GDNFP39905 HAND2-AS1-235ENST00000515376 951 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 RNA5SP438-201ENST00000516561 112 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AF117829.1-204ENST00000519854 284 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 AC246817.1-201ENST00000520024 610 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 AP001207.3-201ENST00000520268 491 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 AC007375.1-201ENST00000554513 578 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AC007956.1-201ENST00000555623 542 ntBASIC4.83□□□□□ -1.64
GDNFP39905 LINC02490-201ENST00000559915 601 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 PWRN1-202ENST00000562501 642 ntTSL 3 BASIC4.83□□□□□ -1.64
GDNFP39905 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC4.83□□□□□ -1.64
GDNFP39905 MIR4504-201ENST00000577413 92 ntBASIC4.83□□□□□ -1.64
GDNFP39905 MOCS2-210ENST00000584946 736 ntTSL 5 BASIC4.83□□□□□ -1.64
GDNFP39905 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC4.83□□□□□ -1.64
GDNFP39905 ATP1B3P1-201ENST00000605365 821 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AC012603.1-201ENST00000606424 528 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AL355816.1-201ENST00000607951 118 ntBASIC4.83□□□□□ -1.64
GDNFP39905 AC245014.3-201ENST00000618589 347 ntBASIC4.83□□□□□ -1.64
GDNFP39905 U2.22-201ENST00000636441 106 ntBASIC4.83□□□□□ -1.64
GDNFP39905 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GDNFP39905 ECT2L-201ENST00000367682 4343 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
GDNFP39905 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
GDNFP39905 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GDNFP39905 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
GDNFP39905 ALS2CR12-201ENST00000286190 1769 ntAPPRIS P3 TSL 1 (best) BASIC4.83□□□□□ -1.64
GDNFP39905 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.83□□□□□ -1.64
GDNFP39905 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC4.83□□□□□ -1.64
GDNFP39905 CASC15-207ENST00000607048 1634 ntTSL 2 BASIC4.83□□□□□ -1.64
GDNFP39905 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.83□□□□□ -1.64
GDNFP39905 AP002512.4-201ENST00000641310 4672 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
GDNFP39905 MYBPC1-202ENST00000361685 3871 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 SLC28A3-201ENST00000376238 4887 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 ADH4-207ENST00000505590 1400 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 BBX-204ENST00000406780 3674 ntAPPRIS P3 TSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 PDE10A-203ENST00000539869 4401 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 RNU6-61P-201ENST00000365528 109 ntBASIC4.82□□□□□ -1.64
GDNFP39905 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 RNU6-1062P-201ENST00000383908 107 ntBASIC4.82□□□□□ -1.64
GDNFP39905 Y_RNA.428-201ENST00000384078 102 ntBASIC4.82□□□□□ -1.64
GDNFP39905 Y_RNA.493-201ENST00000384422 102 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AC004386.1-201ENST00000393214 761 ntBASIC4.82□□□□□ -1.64
GDNFP39905 RNU6-101P-201ENST00000410323 104 ntBASIC4.82□□□□□ -1.64
GDNFP39905 Y_RNA.594-201ENST00000410373 140 ntBASIC4.82□□□□□ -1.64
GDNFP39905 CBLL1-202ENST00000415884 804 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC4.82□□□□□ -1.64
GDNFP39905 AL589987.2-201ENST00000417426 582 ntTSL 2 BASIC4.82□□□□□ -1.64
GDNFP39905 AL139095.3-201ENST00000419672 1203 ntBASIC4.82□□□□□ -1.64
GDNFP39905 U51244.1-201ENST00000423120 374 ntTSL 3 BASIC4.82□□□□□ -1.64
GDNFP39905 BX323845.3-201ENST00000428215 527 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.82□□□□□ -1.64
GDNFP39905 AC236972.1-201ENST00000433225 199 ntBASIC4.82□□□□□ -1.64
GDNFP39905 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.82□□□□□ -1.64
GDNFP39905 PLCB1-IT1-201ENST00000441231 373 ntTSL 3 BASIC4.82□□□□□ -1.64
GDNFP39905 RPS26P56-201ENST00000444468 240 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 SFTA1P-203ENST00000446372 693 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
GDNFP39905 CFL1P4-201ENST00000451536 498 ntBASIC4.82□□□□□ -1.64
GDNFP39905 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 AC245028.2-201ENST00000458673 253 ntBASIC4.82□□□□□ -1.64
GDNFP39905 SCARNA18-201ENST00000459004 134 ntBASIC4.82□□□□□ -1.64
GDNFP39905 RN7SL809P-201ENST00000482040 297 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 LSM3P4-201ENST00000502948 309 ntBASIC4.82□□□□□ -1.64
GDNFP39905 SLC25A15P5-201ENST00000508033 253 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AC116655.1-201ENST00000508324 901 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AC114781.3-201ENST00000512083 142 ntBASIC4.82□□□□□ -1.64
GDNFP39905 Y_RNA.667-201ENST00000516212 107 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AC099520.1-208ENST00000518276 472 ntTSL 3 BASIC4.82□□□□□ -1.64
GDNFP39905 FAM60DP-201ENST00000524174 632 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AP003396.4-201ENST00000527574 265 ntBASIC4.82□□□□□ -1.64
GDNFP39905 AC010768.4-201ENST00000528183 520 ntTSL 3 BASIC4.82□□□□□ -1.64
GDNFP39905 AC002056.2-201ENST00000532913 284 ntTSL 5 BASIC4.82□□□□□ -1.64
GDNFP39905 GNAI2P1-201ENST00000541815 315 ntBASIC4.82□□□□□ -1.64
GDNFP39905 LINC02406-201ENST00000553029 546 ntTSL 3 BASIC4.82□□□□□ -1.64
GDNFP39905 AC023510.1-201ENST00000555862 490 ntTSL 2 BASIC4.82□□□□□ -1.64
GDNFP39905 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC4.82□□□□□ -1.64
GDNFP39905 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC4.82□□□□□ -1.64
GDNFP39905 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 101 ms