Protein–RNA interactions for Protein: P35398

RORA, Nuclear receptor ROR-alpha, humanhuman

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RORAP35398 AC093510.2-201ENST00000562820 896 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC015917.1-201ENST00000579654 510 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC097467.3-205ENST00000597955 594 ntTSL 5 BASIC3.13□□□□□ -1.91
RORAP35398 DPRXP5-201ENST00000604662 539 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC073387.2-201ENST00000604797 784 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC013468.1-201ENST00000608680 598 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC105227.2-201ENST00000615075 605 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC092650.2-201ENST00000619984 902 ntBASIC3.13□□□□□ -1.91
RORAP35398 SNORD39.4-201ENST00000620099 78 ntBASIC3.13□□□□□ -1.91
RORAP35398 AC068880.4-201ENST00000623082 495 ntBASIC3.13□□□□□ -1.91
RORAP35398 SATB1-AS1-237ENST00000626982 735 ntTSL 5 BASIC3.13□□□□□ -1.91
RORAP35398 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.13□□□□□ -1.91
RORAP35398 AL590396.4-201ENST00000636779 956 ntBASIC3.13□□□□□ -1.91
RORAP35398 ZNF833P-201ENST00000424938 1494 ntBASIC3.13□□□□□ -1.91
RORAP35398 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.13□□□□□ -1.91
RORAP35398 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.12□□□□□ -1.91
RORAP35398 RNF17-204ENST00000339524 2203 ntTSL 2 BASIC3.12□□□□□ -1.91
RORAP35398 WDFY3-AS2-202ENST00000451762 5814 ntTSL 3 BASIC3.12□□□□□ -1.91
RORAP35398 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.12□□□□□ -1.91
RORAP35398 CLOCK-201ENST00000309964 10304 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RORAP35398 ZBTB8OS-202ENST00000373501 598 ntTSL 5 BASIC3.12□□□□□ -1.91
RORAP35398 AP002088.1-201ENST00000382740 395 ntBASIC3.12□□□□□ -1.91
RORAP35398 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RORAP35398 RNU6-207P-201ENST00000384137 107 ntBASIC3.12□□□□□ -1.91
RORAP35398 RNU6-441P-201ENST00000384545 106 ntBASIC3.12□□□□□ -1.91
RORAP35398 SNORA48.2-201ENST00000390926 124 ntBASIC3.12□□□□□ -1.91
RORAP35398 NDUFB4P4-201ENST00000404822 243 ntBASIC3.12□□□□□ -1.91
RORAP35398 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.12□□□□□ -1.91
RORAP35398 NDUFB4P5-201ENST00000415445 361 ntBASIC3.12□□□□□ -1.91
RORAP35398 AL356968.1-201ENST00000416622 474 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC012065.2-201ENST00000421295 375 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC012498.1-201ENST00000424037 437 ntBASIC3.12□□□□□ -1.91
RORAP35398 RPL7P46-201ENST00000425129 740 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC096632.1-201ENST00000427395 310 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC114973.1-201ENST00000429057 632 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.12□□□□□ -1.91
RORAP35398 AC009969.1-201ENST00000438726 172 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC3.12□□□□□ -1.91
RORAP35398 HMGN3P1-201ENST00000453847 193 ntBASIC3.12□□□□□ -1.91
RORAP35398 AL133351.1-201ENST00000456189 417 ntTSL 2 BASIC3.12□□□□□ -1.91
RORAP35398 ZBTB8OS-205ENST00000465588 548 ntTSL 2 BASIC3.12□□□□□ -1.91
RORAP35398 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.12□□□□□ -1.91
RORAP35398 AC098799.1-201ENST00000504752 800 ntBASIC3.12□□□□□ -1.91
RORAP35398 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.12□□□□□ -1.91
RORAP35398 MTCYBP37-201ENST00000510642 1133 ntBASIC3.12□□□□□ -1.91
RORAP35398 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.12□□□□□ -1.91
RORAP35398 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.12□□□□□ -1.91
RORAP35398 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.12□□□□□ -1.91
RORAP35398 OR4R2P-201ENST00000530815 597 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC3.12□□□□□ -1.91
RORAP35398 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.12□□□□□ -1.91
RORAP35398 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.12□□□□□ -1.91
RORAP35398 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC3.12□□□□□ -1.91
RORAP35398 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.12□□□□□ -1.91
RORAP35398 LINC01894-201ENST00000580984 487 ntTSL 2 BASIC3.12□□□□□ -1.91
RORAP35398 MIR4506-201ENST00000584693 77 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC011471.1-201ENST00000585766 187 ntBASIC3.12□□□□□ -1.91
RORAP35398 AL669831.4-202ENST00000590817 238 ntBASIC3.12□□□□□ -1.91
RORAP35398 AL162713.1-201ENST00000604480 262 ntBASIC3.12□□□□□ -1.91
RORAP35398 RPL21P136-201ENST00000605378 396 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC018755.4-201ENST00000619715 454 ntBASIC3.12□□□□□ -1.91
RORAP35398 AC006111.3-201ENST00000622137 383 ntBASIC3.12□□□□□ -1.91
RORAP35398 POSTN-209ENST00000541179 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC3.12□□□□□ -1.91
RORAP35398 TAB3-203ENST00000378930 6255 ntAPPRIS P1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RORAP35398 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.12□□□□□ -1.91
RORAP35398 AL355578.1-201ENST00000607405 1328 ntBASIC3.12□□□□□ -1.91
RORAP35398 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC3.12□□□□□ -1.91
RORAP35398 TBC1D31-214ENST00000522420 3167 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RORAP35398 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC3.12□□□□□ -1.91
RORAP35398 MTND5P31-201ENST00000419366 1374 ntBASIC3.12□□□□□ -1.91
RORAP35398 BCLAF1P1-201ENST00000505813 2752 ntBASIC3.12□□□□□ -1.91
RORAP35398 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC3.11□□□□□ -1.91
RORAP35398 RNU1-70P-201ENST00000362618 164 ntBASIC3.11□□□□□ -1.91
RORAP35398 KLRC2-201ENST00000381901 1211 ntAPPRIS ALT2 TSL 5 BASIC3.11□□□□□ -1.91
RORAP35398 MIR128-1-201ENST00000384921 82 ntBASIC3.11□□□□□ -1.91
RORAP35398 MIR16-1-201ENST00000385271 89 ntBASIC3.11□□□□□ -1.91
RORAP35398 AC005162.2-201ENST00000411479 578 ntTSL 4 BASIC3.11□□□□□ -1.91
RORAP35398 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC3.11□□□□□ -1.91
RORAP35398 OFD1P18Y-201ENST00000420889 959 ntBASIC3.11□□□□□ -1.91
RORAP35398 AC233981.1-201ENST00000423224 461 ntBASIC3.11□□□□□ -1.91
RORAP35398 LINC01473-202ENST00000427108 695 ntTSL 5 BASIC3.11□□□□□ -1.91
RORAP35398 AL357514.1-201ENST00000446322 488 ntTSL 3 BASIC3.11□□□□□ -1.91
RORAP35398 AL023581.2-201ENST00000454588 552 ntTSL 2 BASIC3.11□□□□□ -1.91
RORAP35398 CCNB1IP1P3-201ENST00000454702 829 ntBASIC3.11□□□□□ -1.91
RORAP35398 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.11□□□□□ -1.91
RORAP35398 AC109925.1-201ENST00000478069 331 ntBASIC3.11□□□□□ -1.91
RORAP35398 AC131211.1-201ENST00000497285 483 ntTSL 5 BASIC3.11□□□□□ -1.91
RORAP35398 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
RORAP35398 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.11□□□□□ -1.91
RORAP35398 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.11□□□□□ -1.91
RORAP35398 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.11□□□□□ -1.91
RORAP35398 HIGD1AP1-201ENST00000550979 275 ntBASIC3.11□□□□□ -1.91
RORAP35398 SARNP-203ENST00000552080 726 ntTSL 2 BASIC3.11□□□□□ -1.91
RORAP35398 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.11□□□□□ -1.91
RORAP35398 MIR4325-201ENST00000583049 90 ntBASIC3.11□□□□□ -1.91
RORAP35398 SNORD84-203ENST00000584275 78 ntBASIC3.11□□□□□ -1.91
RORAP35398 AC124312.4-201ENST00000605533 310 ntBASIC3.11□□□□□ -1.91
RORAP35398 AC008962.1-201ENST00000605729 304 ntBASIC3.11□□□□□ -1.91
RORAP35398 AL590227.1-201ENST00000622616 315 ntTSL 5 BASIC3.11□□□□□ -1.91
RORAP35398 SMARCA2-229ENST00000634781 1106 ntTSL 1 (best) BASIC3.11□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 86.9 ms