Protein–RNA interactions for Protein: P35052

GPC1, Glypican-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1P35052 LINC01844-201ENST00000432677 2237 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GPC1P35052 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.72□□□□□ -1.49
GPC1P35052 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC1P35052 SLC12A1-201ENST00000330289 1764 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
GPC1P35052 AC097063.1-201ENST00000426714 1797 ntBASIC5.72□□□□□ -1.49
GPC1P35052 SLFN12L-205ENST00000628453 1767 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
GPC1P35052 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC1P35052 DPP8-203ENST00000341861 8699 ntAPPRIS P4 TSL 2 BASIC5.72□□□□□ -1.49
GPC1P35052 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC5.72□□□□□ -1.49
GPC1P35052 HSPA8P4-201ENST00000511877 1920 ntBASIC5.72□□□□□ -1.49
GPC1P35052 CSMD1-215ENST00000537824 13512 ntAPPRIS ALT2 TSL 5 BASIC5.72□□□□□ -1.49
GPC1P35052 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC1P35052 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.72□□□□□ -1.49
GPC1P35052 AP005435.3-201ENST00000531260 3198 ntBASIC5.71□□□□□ -1.49
GPC1P35052 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.71□□□□□ -1.49
GPC1P35052 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
GPC1P35052 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC1P35052 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
GPC1P35052 TEDDM1-201ENST00000367565 2500 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
GPC1P35052 AC016745.2-201ENST00000608834 3443 ntBASIC5.71□□□□□ -1.5
GPC1P35052 CRB1-211ENST00000638467 4348 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC1P35052 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC1P35052 RNY1P16-201ENST00000363063 111 ntBASIC5.71□□□□□ -1.5
GPC1P35052 SNORD1C-201ENST00000363315 78 ntBASIC5.71□□□□□ -1.5
GPC1P35052 RNU6-637P-201ENST00000384050 107 ntBASIC5.71□□□□□ -1.5
GPC1P35052 RNU6-790P-201ENST00000384479 105 ntBASIC5.71□□□□□ -1.5
GPC1P35052 MIR625-201ENST00000385047 85 ntBASIC5.71□□□□□ -1.5
GPC1P35052 RNU11-4P-201ENST00000391149 133 ntBASIC5.71□□□□□ -1.5
GPC1P35052 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC1P35052 RPL7AP51-201ENST00000422016 760 ntBASIC5.71□□□□□ -1.5
GPC1P35052 AC078960.1-201ENST00000422160 177 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC1P35052 RPL12P12-201ENST00000424633 501 ntBASIC5.71□□□□□ -1.5
GPC1P35052 RPL12P17-201ENST00000432393 498 ntBASIC5.71□□□□□ -1.5
GPC1P35052 AL353680.1-201ENST00000433788 337 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC1P35052 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC1P35052 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC1P35052 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC1P35052 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC1P35052 CDH12P4-201ENST00000517835 295 ntBASIC5.71□□□□□ -1.5
GPC1P35052 CDH12P3-201ENST00000517935 295 ntBASIC5.71□□□□□ -1.5
GPC1P35052 CDH12P1-201ENST00000518435 295 ntBASIC5.71□□□□□ -1.5
GPC1P35052 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC1P35052 CBX3P8-201ENST00000532412 525 ntBASIC5.71□□□□□ -1.5
GPC1P35052 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC5.71□□□□□ -1.5
GPC1P35052 SSX4B-202ENST00000619890 1092 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC1P35052 SSX4-202ENST00000620320 1092 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC1P35052 SNAP23-222ENST00000626061 237 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC1P35052 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.71□□□□□ -1.5
GPC1P35052 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
GPC1P35052 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
GPC1P35052 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.71□□□□□ -1.5
GPC1P35052 IGSF10-201ENST00000282466 11067 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
GPC1P35052 SCOC-201ENST00000338517 1864 ntTSL 4 BASIC5.71□□□□□ -1.5
GPC1P35052 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC1P35052 AC022325.1-201ENST00000502748 2199 ntBASIC5.7□□□□□ -1.5
GPC1P35052 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 PPARGC1A-201ENST00000264867 6318 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
GPC1P35052 AC125336.1-201ENST00000508893 2827 ntBASIC5.7□□□□□ -1.5
GPC1P35052 LINC01699-201ENST00000319701 259 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC1P35052 Y_RNA.105-201ENST00000363182 111 ntBASIC5.7□□□□□ -1.5
GPC1P35052 RNU105B-201ENST00000364478 208 ntBASIC5.7□□□□□ -1.5
GPC1P35052 RNA5SP178-201ENST00000410380 128 ntBASIC5.7□□□□□ -1.5
GPC1P35052 RNU2-25P-201ENST00000411041 191 ntBASIC5.7□□□□□ -1.5
GPC1P35052 AL096829.1-201ENST00000413677 457 ntBASIC5.7□□□□□ -1.5
GPC1P35052 RPL35AP31-201ENST00000418340 337 ntBASIC5.7□□□□□ -1.5
GPC1P35052 AKR1B10P1-201ENST00000425765 942 ntBASIC5.7□□□□□ -1.5
GPC1P35052 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC5.7□□□□□ -1.5
GPC1P35052 AL133396.1-201ENST00000432048 687 ntBASIC5.7□□□□□ -1.5
GPC1P35052 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC5.7□□□□□ -1.5
GPC1P35052 CYCSP12-201ENST00000437729 300 ntBASIC5.7□□□□□ -1.5
GPC1P35052 NDUFB1P2-201ENST00000449477 176 ntBASIC5.7□□□□□ -1.5
GPC1P35052 AL138752.1-201ENST00000452964 351 ntBASIC5.7□□□□□ -1.5
GPC1P35052 ACA64.4-201ENST00000459070 127 ntBASIC5.7□□□□□ -1.5
GPC1P35052 AC104164.1-201ENST00000460282 590 ntBASIC5.7□□□□□ -1.5
GPC1P35052 CREM-230ENST00000474931 626 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC1P35052 AC083795.1-201ENST00000491760 320 ntBASIC5.7□□□□□ -1.5
GPC1P35052 AC110792.1-201ENST00000491826 472 ntBASIC5.7□□□□□ -1.5
GPC1P35052 LINC02513-201ENST00000503465 500 ntTSL 2 BASIC5.7□□□□□ -1.5
GPC1P35052 RNU6-27P-201ENST00000516146 107 ntBASIC5.7□□□□□ -1.5
GPC1P35052 RNU5B-3P-201ENST00000516601 115 ntBASIC5.7□□□□□ -1.5
GPC1P35052 RNA5SP441-201ENST00000516809 88 ntBASIC5.7□□□□□ -1.5
GPC1P35052 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC5.7□□□□□ -1.5
GPC1P35052 AC026894.1-201ENST00000532930 850 ntTSL 3 BASIC5.7□□□□□ -1.5
GPC1P35052 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC1P35052 MEG8-215ENST00000555354 469 ntTSL 3 BASIC5.7□□□□□ -1.5
GPC1P35052 AC138207.8-204ENST00000579588 527 ntBASIC5.7□□□□□ -1.5
GPC1P35052 MIR4273-201ENST00000582824 84 ntBASIC5.7□□□□□ -1.5
GPC1P35052 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC1P35052 AC012119.1-201ENST00000603184 222 ntBASIC5.7□□□□□ -1.5
GPC1P35052 FAM27E4-201ENST00000605259 342 ntBASIC5.7□□□□□ -1.5
GPC1P35052 NANOGP3-201ENST00000605855 286 ntBASIC5.7□□□□□ -1.5
GPC1P35052 AL161616.1-201ENST00000611867 286 ntBASIC5.7□□□□□ -1.5
GPC1P35052 MIR1244-1-201ENST00000612829 85 ntBASIC5.7□□□□□ -1.5
GPC1P35052 AL161637.1-201ENST00000622380 412 ntBASIC5.7□□□□□ -1.5
GPC1P35052 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.7□□□□□ -1.5
GPC1P35052 AC129915.3-201ENST00000634128 948 ntBASIC5.7□□□□□ -1.5
GPC1P35052 MIR1244-3-201ENST00000635744 85 ntBASIC5.7□□□□□ -1.5
GPC1P35052 MIR1244-2-201ENST00000636449 85 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms