Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 AP000146.1-202ENST00000441666 441 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 ARL13A-202ENST00000450049 1102 ntAPPRIS P1 TSL 5 BASIC3.96□□□□□ -1.78
HOXC13P31276 AC079776.3-201ENST00000450665 370 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 MTND1P27-201ENST00000451117 902 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AC092162.2-204ENST00000451851 566 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXC13P31276 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 BX510359.1-201ENST00000456973 237 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 UBDP1-202ENST00000457888 382 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 snoU109.3-201ENST00000459477 145 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AC092754.2-201ENST00000463506 460 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.96□□□□□ -1.78
HOXC13P31276 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 PRELID3BP6-201ENST00000503839 571 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AC093292.1-201ENST00000505050 449 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 AC091435.1-201ENST00000505442 584 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 HSPD1P15-201ENST00000505573 1122 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC3.96□□□□□ -1.78
HOXC13P31276 AC112673.1-201ENST00000513168 575 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AC091163.3-201ENST00000518269 1144 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC13P31276 AC022360.2-201ENST00000522390 456 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.96□□□□□ -1.78
HOXC13P31276 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC3.96□□□□□ -1.78
HOXC13P31276 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.96□□□□□ -1.78
HOXC13P31276 MIR3912-201ENST00000577566 105 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 MTCO2P2-201ENST00000591258 225 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AL450336.1-201ENST00000605180 586 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AL160281.1-201ENST00000605307 311 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AL391497.1-201ENST00000608671 547 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AC005344.1-201ENST00000613391 459 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AC009090.3-201ENST00000616553 565 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 AC092628.2-201ENST00000622492 339 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 MTND4P10-201ENST00000446199 1363 ntBASIC3.96□□□□□ -1.78
HOXC13P31276 SLC6A15-203ENST00000450363 4229 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC13P31276 MACF1-231ENST00000564288 24828 ntAPPRIS ALT2 TSL 5 BASIC3.96□□□□□ -1.78
HOXC13P31276 THEMIS-205ENST00000626040 3179 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
HOXC13P31276 NDST4-201ENST00000264363 3351 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
HOXC13P31276 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC13P31276 LINC02471-203ENST00000641941 4752 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 ZNF404-201ENST00000324394 1844 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC13P31276 HSPA8P1-201ENST00000425843 1833 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 C1D-201ENST00000355848 2233 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC13P31276 RTTN-201ENST00000255674 6960 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC13P31276 ABCA12-202ENST00000389661 7005 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC13P31276 AC018555.1-201ENST00000567548 1980 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AP004289.2-201ENST00000444413 1457 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 SEPT7-205ENST00000432293 1362 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC13P31276 SPINK1-201ENST00000296695 542 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
HOXC13P31276 RNA5SP51-201ENST00000364750 119 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 KRTAP27-1-201ENST00000382835 682 ntAPPRIS P1 BASIC3.95□□□□□ -1.78
HOXC13P31276 SNORA51.6-201ENST00000384151 125 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 SNORD65.1-201ENST00000390889 71 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 RNU2-28P-201ENST00000410457 189 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 VN1R51P-201ENST00000411675 945 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 MORF4L1P6-201ENST00000418771 268 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AC016907.1-201ENST00000419483 435 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC13P31276 AL353771.1-201ENST00000422107 457 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC13P31276 OSTCP5-201ENST00000425293 453 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AL136980.1-201ENST00000426764 543 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC13P31276 AL159987.2-201ENST00000432754 307 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AC010132.1-201ENST00000433315 561 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXC13P31276 SPINK8-201ENST00000434006 444 ntAPPRIS P1 TSL 3 BASIC3.95□□□□□ -1.78
HOXC13P31276 AL354977.1-201ENST00000438147 679 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC13P31276 USP9YP22-201ENST00000438971 294 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC13P31276 AL356535.1-201ENST00000440335 398 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 KATNBL1P3-201ENST00000443475 909 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 SETD6P1-201ENST00000444575 317 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AL591719.1-201ENST00000444669 744 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 TPTE2P5-203ENST00000458118 728 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 SNORA59A-201ENST00000459326 152 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 RPS23P3-201ENST00000470993 430 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 RHOBTB3-204ENST00000504179 883 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC13P31276 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC13P31276 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC13P31276 AC027309.2-201ENST00000520566 192 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AC022695.1-201ENST00000522089 237 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXC13P31276 AC007458.1-201ENST00000542812 373 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.95□□□□□ -1.78
HOXC13P31276 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC13P31276 AC069029.1-201ENST00000558736 263 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC13P31276 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC13P31276 AC106782.4-201ENST00000568264 210 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AP001094.1-201ENST00000579805 193 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AC090227.2-201ENST00000591105 340 ntTSL 5 BASIC3.95□□□□□ -1.78
HOXC13P31276 AC119751.7-201ENST00000600494 245 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AL035411.2-201ENST00000604022 421 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AL358072.1-201ENST00000604156 575 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AL137849.1-201ENST00000604767 169 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 PDCD6IPP1-201ENST00000615124 579 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC13P31276 MIR7975-201ENST00000619350 68 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AL360181.4-201ENST00000621752 134 ntBASIC3.95□□□□□ -1.78
HOXC13P31276 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.95□□□□□ -1.78
HOXC13P31276 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.95□□□□□ -1.78
HOXC13P31276 C6orf10-204ENST00000447241 2148 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
HOXC13P31276 CRB1-201ENST00000367397 9023 ntTSL 2 BASIC3.95□□□□□ -1.78
HOXC13P31276 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms