Protein–RNA interactions for Protein: P31271

HOXA13, Homeobox protein Hox-A13, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA13P31271 AL049781.1-201ENST00000623195 3585 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXA13P31271 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXA13P31271 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.03□□□□□ -1.76
HOXA13P31271 RNA5SP50-201ENST00000363731 107 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA13P31271 RNVU1-14-201ENST00000384770 164 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 SNORD17-201ENST00000390930 237 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 OFD1P18Y-201ENST00000420889 959 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXA13P31271 AF228730.2-201ENST00000438784 848 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC4.03□□□□□ -1.76
HOXA13P31271 AC003001.1-201ENST00000443247 1135 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA13P31271 AC073486.1-201ENST00000453278 531 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA13P31271 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA13P31271 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC4.03□□□□□ -1.76
HOXA13P31271 RPS15AP17-201ENST00000470598 390 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 AC084357.1-201ENST00000473404 255 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 AC004263.1-201ENST00000479327 332 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA13P31271 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA13P31271 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA13P31271 AC074250.1-201ENST00000511117 192 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 ELOC-204ENST00000519487 814 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HOXA13P31271 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC4.03□□□□□ -1.76
HOXA13P31271 AC008489.1-201ENST00000524271 483 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC4.03□□□□□ -1.76
HOXA13P31271 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA13P31271 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA13P31271 AC009094.1-201ENST00000564443 426 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC4.03□□□□□ -1.76
HOXA13P31271 LINC01255-206ENST00000591431 441 ntTSL 5 BASIC4.03□□□□□ -1.76
HOXA13P31271 AC069304.2-201ENST00000605154 435 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 HMGN2P28-201ENST00000606102 262 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 AC007490.1-201ENST00000624321 703 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC4.03□□□□□ -1.76
HOXA13P31271 AP002907.1-201ENST00000606361 1430 ntBASIC4.03□□□□□ -1.76
HOXA13P31271 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC4.03□□□□□ -1.77
HOXA13P31271 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXA13P31271 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 SAGE4P-201ENST00000442271 3381 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 ATP13A3-203ENST00000439040 7720 ntAPPRIS P1 TSL 5 BASIC4.02□□□□□ -1.77
HOXA13P31271 MTCO1P23-201ENST00000415223 1526 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 ST7-221ENST00000465133 2155 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXA13P31271 MS4A1-212ENST00000534668 3475 ntAPPRIS P1 TSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 RNA5SP42-201ENST00000364278 115 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 Y_RNA.333-201ENST00000365274 102 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC4.02□□□□□ -1.77
HOXA13P31271 RNU6-339P-201ENST00000384310 107 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AL121972.1-201ENST00000402023 252 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 MTND4LP20-201ENST00000402379 270 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 RPL23AP48-201ENST00000406913 488 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AC107081.1-201ENST00000414975 361 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AC097713.2-201ENST00000430199 356 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 MTND1P32-201ENST00000433043 938 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 MTND4P6-201ENST00000438297 472 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 MTCYBP34-201ENST00000439552 670 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXA13P31271 AC104978.1-201ENST00000449387 391 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AL589935.1-212ENST00000450998 525 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 RPS20P24-201ENST00000457473 361 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AC087312.1-201ENST00000471411 480 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 NAA50-206ENST00000493454 964 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 CTD-2350J17.1-201ENST00000509228 362 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXA13P31271 TRIQK-209ENST00000519969 555 ntAPPRIS P1 TSL 4 BASIC4.02□□□□□ -1.77
HOXA13P31271 AP003461.1-201ENST00000528866 78 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AP003385.6-201ENST00000531603 374 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXA13P31271 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXA13P31271 AC120045.1-201ENST00000563502 251 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXA13P31271 AC139426.2-201ENST00000568289 251 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXA13P31271 MIR4637-201ENST00000582405 84 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 AC103881.1-201ENST00000603476 538 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXA13P31271 AC007179.3-201ENST00000604976 235 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC4.02□□□□□ -1.77
HOXA13P31271 AP003355.3-201ENST00000623465 114 ntBASIC4.02□□□□□ -1.77
HOXA13P31271 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC4.02□□□□□ -1.77
HOXA13P31271 OR5T1-201ENST00000641368 1118 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
HOXA13P31271 ATP2B1-203ENST00000393164 3127 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXA13P31271 PKN2-AS1-202ENST00000458097 3542 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 GAB1-203ENST00000505913 2477 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC4.02□□□□□ -1.77
HOXA13P31271 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC4.02□□□□□ -1.77
HOXA13P31271 PTAR1-202ENST00000377200 9876 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
HOXA13P31271 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA13P31271 USH2A-201ENST00000307340 18883 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA13P31271 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.01□□□□□ -1.77
HOXA13P31271 MCF2-202ENST00000370573 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA13P31271 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC4.01□□□□□ -1.77
HOXA13P31271 MIR34B-201ENST00000385076 84 ntBASIC4.01□□□□□ -1.77
HOXA13P31271 RPL31P1-201ENST00000398116 372 ntBASIC4.01□□□□□ -1.77
HOXA13P31271 ZRANB2-AS2-201ENST00000411721 518 ntTSL 3 BASIC4.01□□□□□ -1.77
HOXA13P31271 HSFY4P-201ENST00000415994 1181 ntBASIC4.01□□□□□ -1.77
HOXA13P31271 AC092832.1-201ENST00000422934 400 ntBASIC4.01□□□□□ -1.77
HOXA13P31271 GLRXP1-201ENST00000423261 334 ntBASIC4.01□□□□□ -1.77
HOXA13P31271 OFD1P12Y-201ENST00000427963 1207 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 102.4 ms