Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 ASPH-224ENST00000522603 842 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 AC008489.1-201ENST00000524271 483 ntBASIC3.34□□□□□ -1.87
SHC1P29353 RGS5-206ENST00000527988 373 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 LINC02378-201ENST00000540399 1003 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC1P29353 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.34□□□□□ -1.87
SHC1P29353 GTF2IP8-201ENST00000560687 584 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AC012435.1-202ENST00000568772 240 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AC012213.3-201ENST00000577199 777 ntBASIC3.34□□□□□ -1.87
SHC1P29353 MIR5187-201ENST00000583479 76 ntBASIC3.34□□□□□ -1.87
SHC1P29353 NTAN1P1-201ENST00000603150 646 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AL049634.3-201ENST00000604968 457 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AC006270.3-201ENST00000605967 1036 ntBASIC3.34□□□□□ -1.87
SHC1P29353 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC1P29353 AC105429.2-201ENST00000610567 517 ntBASIC3.34□□□□□ -1.87
SHC1P29353 RNVU1-4-201ENST00000612985 164 ntBASIC3.34□□□□□ -1.87
SHC1P29353 ST7-OT4_4.1-201ENST00000614993 213 ntBASIC3.34□□□□□ -1.87
SHC1P29353 AC069209.1-201ENST00000619282 651 ntBASIC3.34□□□□□ -1.87
SHC1P29353 SATB1-AS1-269ENST00000630766 591 ntTSL 5 BASIC3.34□□□□□ -1.87
SHC1P29353 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC3.34□□□□□ -1.87
SHC1P29353 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHC1P29353 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC3.34□□□□□ -1.88
SHC1P29353 MTND4P34-201ENST00000572715 1371 ntBASIC3.34□□□□□ -1.88
SHC1P29353 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.34□□□□□ -1.88
SHC1P29353 ZNF33CP-201ENST00000432492 2030 ntBASIC3.34□□□□□ -1.88
SHC1P29353 LPAR4-201ENST00000435339 2611 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHC1P29353 SYNE1-207ENST00000367255 27748 ntAPPRIS P4 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHC1P29353 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC3.34□□□□□ -1.88
SHC1P29353 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC3.34□□□□□ -1.88
SHC1P29353 MAPK6PS3-201ENST00000403865 2162 ntBASIC3.34□□□□□ -1.88
SHC1P29353 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHC1P29353 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHC1P29353 XIAPP3-201ENST00000312918 795 ntBASIC3.33□□□□□ -1.88
SHC1P29353 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 RNA5SP391-201ENST00000363456 119 ntBASIC3.33□□□□□ -1.88
SHC1P29353 RNA5SP51-201ENST00000364750 119 ntBASIC3.33□□□□□ -1.88
SHC1P29353 MIR124-3-201ENST00000384866 87 ntBASIC3.33□□□□□ -1.88
SHC1P29353 MIR554-201ENST00000384874 96 ntBASIC3.33□□□□□ -1.88
SHC1P29353 MIR184-201ENST00000384962 84 ntBASIC3.33□□□□□ -1.88
SHC1P29353 MT-TH-201ENST00000387441 69 ntBASIC3.33□□□□□ -1.88
SHC1P29353 TAF9BP1-201ENST00000396646 746 ntBASIC3.33□□□□□ -1.88
SHC1P29353 RN7SKP177-201ENST00000410567 355 ntBASIC3.33□□□□□ -1.88
SHC1P29353 PIGPP2-201ENST00000411569 458 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC068533.2-201ENST00000411872 306 ntBASIC3.33□□□□□ -1.88
SHC1P29353 RAB9AP3-201ENST00000412737 573 ntBASIC3.33□□□□□ -1.88
SHC1P29353 PRELID3BP11-201ENST00000414230 479 ntBASIC3.33□□□□□ -1.88
SHC1P29353 LINC01934-201ENST00000414750 391 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 AC005104.1-201ENST00000414896 442 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 AC244035.1-201ENST00000430042 390 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AL023693.1-201ENST00000434255 216 ntTSL 5 BASIC3.33□□□□□ -1.88
SHC1P29353 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 RPL7P59-201ENST00000447700 943 ntBASIC3.33□□□□□ -1.88
SHC1P29353 RAB9AP1-201ENST00000449393 573 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC107072.2-201ENST00000452412 555 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 AL606519.1-201ENST00000458146 580 ntTSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 AC022034.3-201ENST00000471393 478 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AP000926.1-201ENST00000479573 241 ntBASIC3.33□□□□□ -1.88
SHC1P29353 RPS3AP50-201ENST00000487064 803 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AL024509.2-201ENST00000493462 493 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 MSMO1-203ENST00000504317 1026 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHC1P29353 AC090071.1-201ENST00000507713 644 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 MTCO3P7-201ENST00000510008 774 ntBASIC3.33□□□□□ -1.88
SHC1P29353 LINC02113-201ENST00000510302 336 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 AC112178.1-201ENST00000511165 676 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 SAP18P1-201ENST00000512058 390 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC008494.2-201ENST00000514544 370 ntBASIC3.33□□□□□ -1.88
SHC1P29353 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC3.33□□□□□ -1.88
SHC1P29353 RNU6-885P-201ENST00000516607 104 ntBASIC3.33□□□□□ -1.88
SHC1P29353 RN7SKP283-201ENST00000517197 270 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC023200.1-201ENST00000519660 651 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.33□□□□□ -1.88
SHC1P29353 AC007876.1-201ENST00000527562 983 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
SHC1P29353 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.33□□□□□ -1.88
SHC1P29353 IAPP-204ENST00000539393 409 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 AL121766.1-201ENST00000547436 487 ntBASIC3.33□□□□□ -1.88
SHC1P29353 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 ROCK1P1-201ENST00000573767 549 ntBASIC3.33□□□□□ -1.88
SHC1P29353 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.33□□□□□ -1.88
SHC1P29353 KLKP1-201ENST00000595979 403 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AL031985.2-201ENST00000600955 480 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AF131215.7-201ENST00000602443 707 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC004987.4-201ENST00000603383 338 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC009220.3-201ENST00000604318 586 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC112230.1-201ENST00000604342 547 ntBASIC3.33□□□□□ -1.88
SHC1P29353 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.33□□□□□ -1.88
SHC1P29353 MIR6864-201ENST00000617935 70 ntBASIC3.33□□□□□ -1.88
SHC1P29353 C8orf59-213ENST00000619594 859 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHC1P29353 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.33□□□□□ -1.88
SHC1P29353 TLR6-205ENST00000610323 1443 ntTSL 5 BASIC3.33□□□□□ -1.88
SHC1P29353 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC3.33□□□□□ -1.88
SHC1P29353 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.33□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 95.3 ms