Protein–RNA interactions for Protein: P28068

HLA-DMB, HLA class II histocompatibility antigen, DM beta chain, humanhuman

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMBP28068 AP001029.3-201ENST00000588063 596 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AL451007.1-201ENST00000595491 289 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 VN1R92P-201ENST00000598511 928 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC015871.2-201ENST00000603605 948 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AL359198.2-201ENST00000611836 194 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AL020991.1-201ENST00000612314 373 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC009039.2-201ENST00000624524 529 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC046144.1-201ENST00000478559 1853 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
HLA-DMBP28068 CEP83-202ENST00000397807 2737 ntTSL 5 BASIC2.24□□□□□ -2.05
HLA-DMBP28068 FAM35BP-202ENST00000497389 3337 ntBASIC2.24□□□□□ -2.05
HLA-DMBP28068 AL645568.2-201ENST00000432815 1337 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 ZNF734P-201ENST00000419494 1534 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 ZNF807-201ENST00000328088 1707 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 FTX-214ENST00000638437 12267 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DMBP28068 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 RPL9P7-201ENST00000330965 580 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 RNU6-543P-201ENST00000362576 108 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 RNU6-374P-201ENST00000364146 108 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 SNORA27.3-201ENST00000364937 134 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 MIR181A2-201ENST00000384863 110 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 RPL31P1-201ENST00000398116 372 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 RPS3AP26-201ENST00000398259 784 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 UBA52P6-201ENST00000399822 382 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 MTND4P13-201ENST00000402078 1023 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 SNORA11C-201ENST00000408532 129 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 RAD23BP2-201ENST00000416003 1207 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC087857.1-201ENST00000425894 467 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 SAR1AP4-201ENST00000429225 591 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC004865.1-201ENST00000442276 1003 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AL162389.1-201ENST00000449233 177 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 ITCH-AS1-201ENST00000454205 299 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC008885.1-201ENST00000514930 301 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC097535.1-201ENST00000515263 332 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC009812.2-201ENST00000517657 457 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 AP003385.6-201ENST00000531603 374 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC084819.1-201ENST00000537293 424 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC090607.1-201ENST00000560057 449 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC106782.4-201ENST00000568264 210 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 SMG1P7-203ENST00000573141 619 ntTSL 2 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC024610.1-201ENST00000582685 323 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 AL669831.4-202ENST00000590817 238 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC023043.3-201ENST00000593113 385 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC006539.2-201ENST00000601729 572 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 AC113368.1-201ENST00000603736 382 ntBASIC2.23□□□□□ -2.05
HLA-DMBP28068 KBTBD2-208ENST00000621876 1196 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 CPXCR1-201ENST00000276127 1630 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DMBP28068 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DMBP28068 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
HLA-DMBP28068 KBTBD3-207ENST00000534815 3396 ntTSL 5 BASIC2.23□□□□□ -2.05
HLA-DMBP28068 Z82195.2-201ENST00000612348 18351 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 AL136520.1-201ENST00000600311 1322 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 MLF1-203ENST00000392822 2157 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 FNBP1L-203ENST00000370253 3889 ntAPPRIS ALT1 TSL 5 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 C11orf40-201ENST00000307616 654 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DMBP28068 RNU6-263P-201ENST00000363811 107 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 RNU1-140P-201ENST00000365040 165 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 MIR634-201ENST00000385208 97 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 AL451074.5-201ENST00000415894 435 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 UBE2D3P2-201ENST00000424409 445 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 RPL35AP12-201ENST00000425362 338 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 AC006548.1-201ENST00000427470 102 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 AC073508.1-201ENST00000428866 656 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 UBE2V1P6-201ENST00000430840 422 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 RABEPKP1-201ENST00000440529 1026 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 NANOGNBP1-201ENST00000448444 480 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 RSL24D1P3-201ENST00000449255 495 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 TEX41-209ENST00000451478 452 ntTSL 2 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 AC008571.1-201ENST00000467232 300 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 S100A11P2-201ENST00000467589 312 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 AC105914.1-201ENST00000511798 226 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 AC022118.1-201ENST00000512352 547 ntTSL 5 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 RNU6-826P-201ENST00000516827 104 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 PSMA2P1-201ENST00000526365 646 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 AP003718.1-201ENST00000529884 583 ntTSL 4 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 SMILR-201ENST00000533992 553 ntTSL 4 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 SULT6B1-205ENST00000535679 1027 ntAPPRIS P1 TSL 1 (best) BASIC2.22□□□□□ -2.05
HLA-DMBP28068 REXO2-218ENST00000544827 880 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 H3F3AP1-201ENST00000559984 334 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 AC096947.1-201ENST00000603233 470 ntBASIC2.22□□□□□ -2.05
HLA-DMBP28068 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.22□□□□□ -2.05
HLA-DMBP28068 AL162574.2-201ENST00000614618 657 ntBASIC2.22□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 91.4 ms