Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 AC135279.1-201ENST00000543493 504 ntBASIC3.96□□□□□ -1.78
PCNAP12004 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC3.96□□□□□ -1.78
PCNAP12004 AC118755.1-201ENST00000572923 195 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 MIR4284-201ENST00000578924 81 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC012417.1-201ENST00000582307 1039 ntBASIC3.96□□□□□ -1.78
PCNAP12004 MIR544B-201ENST00000582372 78 ntBASIC3.96□□□□□ -1.78
PCNAP12004 ZNF230-204ENST00000585632 579 ntTSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC3.96□□□□□ -1.78
PCNAP12004 AC024563.1-202ENST00000597533 419 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 AC119751.7-201ENST00000600494 245 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC239868.4-201ENST00000608318 671 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC3.96□□□□□ -1.78
PCNAP12004 BIRC6-AS2-201ENST00000623382 589 ntTSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 AC040168.1-201ENST00000623594 991 ntBASIC3.96□□□□□ -1.78
PCNAP12004 AP005264.7-201ENST00000625003 745 ntBASIC3.96□□□□□ -1.78
PCNAP12004 MIR3653-201ENST00000625572 110 ntBASIC3.96□□□□□ -1.78
PCNAP12004 MIR7641-1-201ENST00000627518 61 ntBASIC3.96□□□□□ -1.78
PCNAP12004 GOLT1B-210ENST00000631252 223 ntTSL 3 BASIC3.96□□□□□ -1.78
PCNAP12004 LARP1BP1-201ENST00000506036 1359 ntBASIC3.96□□□□□ -1.78
PCNAP12004 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 LMNTD1-204ENST00000458174 1677 ntAPPRIS ALT2 TSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.96□□□□□ -1.78
PCNAP12004 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
PCNAP12004 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.96□□□□□ -1.78
PCNAP12004 MBNL1-218ENST00000485910 4257 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCNAP12004 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCNAP12004 HMGB1-204ENST00000399489 1727 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCNAP12004 DTWD2-201ENST00000304058 4365 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCNAP12004 DLG1-217ENST00000452595 3053 ntTSL 2 BASIC3.95□□□□□ -1.78
PCNAP12004 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.95□□□□□ -1.78
PCNAP12004 NMD3P1-201ENST00000439704 1488 ntBASIC3.95□□□□□ -1.78
PCNAP12004 RNU5F-6P-201ENST00000362979 116 ntBASIC3.95□□□□□ -1.78
PCNAP12004 Y_RNA.97-201ENST00000363094 102 ntBASIC3.95□□□□□ -1.78
PCNAP12004 RNU6-501P-201ENST00000364072 100 ntBASIC3.95□□□□□ -1.78
PCNAP12004 RHEBP3-201ENST00000411920 351 ntBASIC3.95□□□□□ -1.78
PCNAP12004 CYCSP46-201ENST00000423569 204 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AL391336.1-201ENST00000424678 484 ntTSL 3 BASIC3.95□□□□□ -1.78
PCNAP12004 AC007742.1-201ENST00000425789 329 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AC239803.1-202ENST00000432038 590 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCNAP12004 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
PCNAP12004 ELOCP26-201ENST00000436067 329 ntBASIC3.95□□□□□ -1.78
PCNAP12004 CYCSP43-201ENST00000438233 310 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC3.95□□□□□ -1.78
PCNAP12004 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC3.95□□□□□ -1.78
PCNAP12004 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.95□□□□□ -1.78
PCNAP12004 MTND4LP3-201ENST00000468320 276 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AC087312.1-201ENST00000471411 480 ntBASIC3.95□□□□□ -1.78
PCNAP12004 LEKR1-206ENST00000483177 546 ntTSL 3 BASIC3.95□□□□□ -1.78
PCNAP12004 AC023424.2-201ENST00000493479 777 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AC082651.2-201ENST00000496833 166 ntBASIC3.95□□□□□ -1.78
PCNAP12004 TMEM248P1-201ENST00000510579 951 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AC034159.1-201ENST00000513885 583 ntBASIC3.95□□□□□ -1.78
PCNAP12004 RNU2-58P-201ENST00000516403 183 ntBASIC3.95□□□□□ -1.78
PCNAP12004 Y_RNA.695-201ENST00000516715 107 ntBASIC3.95□□□□□ -1.78
PCNAP12004 RNU7-143P-201ENST00000516781 65 ntBASIC3.95□□□□□ -1.78
PCNAP12004 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.95□□□□□ -1.78
PCNAP12004 AC084824.1-201ENST00000550917 1005 ntBASIC3.95□□□□□ -1.78
PCNAP12004 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.95□□□□□ -1.78
PCNAP12004 AL355773.1-201ENST00000554458 459 ntTSL 3 BASIC3.95□□□□□ -1.78
PCNAP12004 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC3.95□□□□□ -1.78
PCNAP12004 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.95□□□□□ -1.78
PCNAP12004 PCMTD1P2-201ENST00000565017 355 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AC023575.1-201ENST00000580510 358 ntBASIC3.95□□□□□ -1.78
PCNAP12004 MIR548AB-201ENST00000584917 84 ntBASIC3.95□□□□□ -1.78
PCNAP12004 RPL23AP92-201ENST00000603609 255 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AC090186.1-201ENST00000605991 572 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AC080013.4-201ENST00000607624 649 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AL445264.1-201ENST00000621719 171 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AC068137.4-201ENST00000638485 296 ntBASIC3.95□□□□□ -1.78
PCNAP12004 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
PCNAP12004 TNPO1P3-201ENST00000436471 2662 ntBASIC3.95□□□□□ -1.78
PCNAP12004 AL390237.1-201ENST00000404226 1415 ntBASIC3.95□□□□□ -1.78
PCNAP12004 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
PCNAP12004 LINC02510-201ENST00000509798 1576 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC3.94□□□□□ -1.78
PCNAP12004 AC004852.2-204ENST00000614137 1370 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 SPA17-201ENST00000227135 853 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 RNU5F-7P-201ENST00000363696 115 ntBASIC3.94□□□□□ -1.78
PCNAP12004 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
PCNAP12004 RNU6-878P-201ENST00000384578 110 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC025750.1-201ENST00000399891 379 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AL355379.1-201ENST00000405542 640 ntBASIC3.94□□□□□ -1.78
PCNAP12004 RNU2-15P-201ENST00000410692 191 ntBASIC3.94□□□□□ -1.78
PCNAP12004 RNU4-78P-201ENST00000410940 126 ntBASIC3.94□□□□□ -1.78
PCNAP12004 RN7SKP142-201ENST00000411236 328 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.94□□□□□ -1.78
PCNAP12004 EIF1AX-AS1-201ENST00000424026 378 ntTSL 5 BASIC3.94□□□□□ -1.78
PCNAP12004 AL589823.1-201ENST00000429577 183 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC3.94□□□□□ -1.78
PCNAP12004 RPS4XP4-201ENST00000443195 763 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AL590399.6-201ENST00000446396 307 ntBASIC3.94□□□□□ -1.78
PCNAP12004 COX6CP12-201ENST00000446748 202 ntBASIC3.94□□□□□ -1.78
PCNAP12004 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC3.94□□□□□ -1.78
PCNAP12004 MTND1P29-201ENST00000448112 647 ntBASIC3.94□□□□□ -1.78
PCNAP12004 RPL29P29-201ENST00000448725 423 ntBASIC3.94□□□□□ -1.78
PCNAP12004 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 81 ms