Protein–RNA interactions for Protein: P08100

RHO, Rhodopsin, humanhuman

Predictions only

Length 348 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHOP08100 AL359313.1-202ENST00000635073 544 ntTSL 4 BASIC4.45□□□□□ -1.7
RHOP08100 U6.101-201ENST00000637707 76 ntBASIC4.45□□□□□ -1.7
RHOP08100 CARF-208ENST00000428585 2513 ntTSL 2 BASIC4.45□□□□□ -1.7
RHOP08100 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
RHOP08100 PTRH2-203ENST00000470557 4114 ntAPPRIS P3 BASIC4.45□□□□□ -1.7
RHOP08100 FARSBP1-201ENST00000435808 1778 ntBASIC4.45□□□□□ -1.7
RHOP08100 OR11H5P-202ENST00000641612 1325 ntBASIC4.45□□□□□ -1.7
RHOP08100 AC017104.4-201ENST00000636283 1592 ntBASIC4.44□□□□□ -1.7
RHOP08100 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
RHOP08100 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC110597.3-202ENST00000583493 3289 ntTSL 5 BASIC4.44□□□□□ -1.7
RHOP08100 USP29-202ENST00000598197 3284 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RHOP08100 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.44□□□□□ -1.7
RHOP08100 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RHOP08100 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
RHOP08100 MIR1277-201ENST00000408536 78 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC079150.1-201ENST00000413043 383 ntTSL 3 BASIC4.44□□□□□ -1.7
RHOP08100 AC002456.1-201ENST00000415965 317 ntTSL 5 BASIC4.44□□□□□ -1.7
RHOP08100 AC245052.5-201ENST00000416320 649 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC073136.2-201ENST00000417282 849 ntBASIC4.44□□□□□ -1.7
RHOP08100 CR769775.2-201ENST00000417850 891 ntTSL 3 BASIC4.44□□□□□ -1.7
RHOP08100 AL445669.1-201ENST00000426743 755 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC016912.1-201ENST00000432241 545 ntTSL 3 BASIC4.44□□□□□ -1.7
RHOP08100 AC009961.2-201ENST00000435771 251 ntBASIC4.44□□□□□ -1.7
RHOP08100 AL356276.2-201ENST00000435919 558 ntBASIC4.44□□□□□ -1.7
RHOP08100 MTCO3P18-201ENST00000440206 761 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC4.44□□□□□ -1.7
RHOP08100 PRR16-203ENST00000446965 1152 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RHOP08100 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.44□□□□□ -1.7
RHOP08100 AL359385.1-201ENST00000456509 365 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC013267.1-201ENST00000458227 267 ntBASIC4.44□□□□□ -1.7
RHOP08100 AL591473.1-201ENST00000464297 313 ntBASIC4.44□□□□□ -1.7
RHOP08100 RPL31P50-201ENST00000471002 296 ntBASIC4.44□□□□□ -1.7
RHOP08100 AL163973.3-201ENST00000547093 430 ntTSL 3 BASIC4.44□□□□□ -1.7
RHOP08100 AC133480.1-201ENST00000547563 381 ntTSL 3 BASIC4.44□□□□□ -1.7
RHOP08100 DYNLL1P4-201ENST00000549314 266 ntBASIC4.44□□□□□ -1.7
RHOP08100 RPL21P5-201ENST00000554662 472 ntBASIC4.44□□□□□ -1.7
RHOP08100 AL133457.1-201ENST00000564251 987 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC137800.2-201ENST00000574375 120 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC053481.4-201ENST00000583164 216 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC091135.1-201ENST00000585943 307 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC006504.3-201ENST00000586818 523 ntBASIC4.44□□□□□ -1.7
RHOP08100 ZNF682-204ENST00000593468 581 ntTSL 4 BASIC4.44□□□□□ -1.7
RHOP08100 AC010201.1-201ENST00000605051 540 ntBASIC4.44□□□□□ -1.7
RHOP08100 UBE2Q2P2-203ENST00000613592 761 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC025253.1-201ENST00000613623 543 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC131238.1-201ENST00000617135 328 ntBASIC4.44□□□□□ -1.7
RHOP08100 MIR3688-2-201ENST00000636963 87 ntBASIC4.44□□□□□ -1.7
RHOP08100 AC008013.2-202ENST00000637965 364 ntBASIC4.44□□□□□ -1.7
RHOP08100 FAM157B-203ENST00000639350 358 ntBASIC4.44□□□□□ -1.7
RHOP08100 POU2F1-206ENST00000429375 13651 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
RHOP08100 MALRD1-204ENST00000454679 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHOP08100 ZNF726-205ENST00000575986 1522 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
RHOP08100 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
RHOP08100 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC4.44□□□□□ -1.7
RHOP08100 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
RHOP08100 NFIB-211ENST00000606230 2311 ntTSL 5 BASIC4.44□□□□□ -1.7
RHOP08100 TMEM30A-202ENST00000370050 3775 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RHOP08100 OR2H1-203ENST00000377136 3024 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RHOP08100 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.43□□□□□ -1.7
RHOP08100 ZNF208-207ENST00000609966 3653 ntTSL 5 BASIC4.43□□□□□ -1.7
RHOP08100 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.43□□□□□ -1.7
RHOP08100 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC4.43□□□□□ -1.7
RHOP08100 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.43□□□□□ -1.7
RHOP08100 Y_RNA.390-201ENST00000383932 102 ntBASIC4.43□□□□□ -1.7
RHOP08100 MIR554-201ENST00000384874 96 ntBASIC4.43□□□□□ -1.7
RHOP08100 RNU11-4P-201ENST00000391149 133 ntBASIC4.43□□□□□ -1.7
RHOP08100 RNU6-952P-201ENST00000391164 108 ntBASIC4.43□□□□□ -1.7
RHOP08100 SNORD115-47-201ENST00000391226 86 ntBASIC4.43□□□□□ -1.7
RHOP08100 DHFRP6-201ENST00000401776 268 ntBASIC4.43□□□□□ -1.7
RHOP08100 MTCO2P19-201ENST00000427513 598 ntBASIC4.43□□□□□ -1.7
RHOP08100 TIMM9P3-201ENST00000428659 274 ntBASIC4.43□□□□□ -1.7
RHOP08100 NPM1P34-201ENST00000428821 893 ntBASIC4.43□□□□□ -1.7
RHOP08100 AC023347.2-201ENST00000433994 462 ntBASIC4.43□□□□□ -1.7
RHOP08100 ARHGEF7-AS1-201ENST00000435037 321 ntTSL 3 BASIC4.43□□□□□ -1.7
RHOP08100 AL121601.2-201ENST00000438019 707 ntBASIC4.43□□□□□ -1.7
RHOP08100 GAPDHP17-201ENST00000449858 1001 ntBASIC4.43□□□□□ -1.7
RHOP08100 Z82190.1-201ENST00000454534 490 ntBASIC4.43□□□□□ -1.7
RHOP08100 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC4.43□□□□□ -1.7
RHOP08100 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC4.43□□□□□ -1.7
RHOP08100 BTF3P5-201ENST00000457252 467 ntBASIC4.43□□□□□ -1.7
RHOP08100 RN7SL542P-201ENST00000467147 294 ntBASIC4.43□□□□□ -1.7
RHOP08100 VN1R105P-201ENST00000486595 910 ntBASIC4.43□□□□□ -1.7
RHOP08100 RPS4XP18-201ENST00000495480 763 ntBASIC4.43□□□□□ -1.7
RHOP08100 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC4.43□□□□□ -1.7
RHOP08100 LINC02061-201ENST00000514225 335 ntTSL 3 BASIC4.43□□□□□ -1.7
RHOP08100 RNU6-1003P-201ENST00000517099 105 ntBASIC4.43□□□□□ -1.7
RHOP08100 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.43□□□□□ -1.7
RHOP08100 RPL23AP97-201ENST00000568955 471 ntBASIC4.43□□□□□ -1.7
RHOP08100 LARP7P2-201ENST00000575306 125 ntBASIC4.43□□□□□ -1.7
RHOP08100 MAGOH2P-202ENST00000584384 429 ntBASIC4.43□□□□□ -1.7
RHOP08100 SLC25A36P1-201ENST00000590111 465 ntBASIC4.43□□□□□ -1.7
RHOP08100 AL359999.1-201ENST00000604513 294 ntBASIC4.43□□□□□ -1.7
RHOP08100 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC4.43□□□□□ -1.7
RHOP08100 AC080013.4-201ENST00000607624 649 ntBASIC4.43□□□□□ -1.7
RHOP08100 AC091965.4-201ENST00000607691 587 ntBASIC4.43□□□□□ -1.7
RHOP08100 AC092954.2-201ENST00000609103 430 ntBASIC4.43□□□□□ -1.7
RHOP08100 AL158209.2-201ENST00000619266 216 ntBASIC4.43□□□□□ -1.7
RHOP08100 AL359880.1-201ENST00000621879 266 ntBASIC4.43□□□□□ -1.7
RHOP08100 CEP192-201ENST00000325971 7764 ntTSL 5 BASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms