Protein–RNA interactions for Protein: P04440

HLA-DPB1, HLA class II histocompatibility antigen, DP beta 1 chain, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPB1P04440 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC044913.1-201ENST00000557200 430 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 RPL21P12-201ENST00000559810 515 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC106745.1-201ENST00000566798 464 ntTSL 2 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC068620.3-201ENST00000602749 560 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC073657.2-201ENST00000605661 303 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AL512427.1-201ENST00000618593 349 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC007275.1-201ENST00000621243 671 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 DLG2-AS1_1.1-201ENST00000622319 213 ntBASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 TUBD1-214ENST00000592426 1460 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC2.76□□□□□ -1.97
HLA-DPB1P04440 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 OR1S2-201ENST00000302592 978 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 OR2B2-201ENST00000303324 1212 ntAPPRIS P1 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 CASP1-201ENST00000353247 423 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 SNORA63.1-201ENST00000362493 131 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 RNU6-600P-201ENST00000362524 99 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 RNA5SP267-201ENST00000364893 126 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 TAF9BP1-201ENST00000396646 746 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AC110754.1-201ENST00000399740 601 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AL121978.1-201ENST00000402778 359 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AL357075.1-201ENST00000404107 726 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 MIR1250-201ENST00000408098 113 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 SNORD88.1-201ENST00000408684 91 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 Z93403.1-201ENST00000411879 895 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 BTF3P8-201ENST00000414577 526 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 RBM6-203ENST00000421682 684 ntTSL 2 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 C1DP1-201ENST00000426049 402 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 Z93242.1-201ENST00000427102 353 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AC005326.1-201ENST00000429197 123 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AL353705.1-201ENST00000433468 480 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 ARF4P4-201ENST00000439608 520 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 CASP1-203ENST00000446369 948 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 Z75741.1-201ENST00000446793 314 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 CFTRP1-201ENST00000456646 183 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 BTF3P5-201ENST00000457252 467 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AL049829.1-201ENST00000465411 156 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AC108860.1-201ENST00000484521 383 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 HMGB1P22-201ENST00000505315 124 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 INPP4B-206ENST00000506217 673 ntTSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 SLC25A15P5-201ENST00000508033 253 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 CFL2-206ENST00000556161 546 ntTSL 4 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 OR4H12P-201ENST00000556269 907 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 ZNF192P1-203ENST00000565888 810 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AC104072.1-201ENST00000568817 668 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AC090079.2-201ENST00000575289 768 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AP001542.2-201ENST00000593141 364 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 CKS1BP3-201ENST00000600888 237 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 GAS5-AS1-201ENST00000602767 694 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AL606834.2-201ENST00000602954 668 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 SRGNP1-201ENST00000603392 451 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 IGHV3-29-201ENST00000604817 344 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 LINC01440-205ENST00000608080 737 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AC069234.5-201ENST00000611056 416 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AC004777.1-201ENST00000624317 287 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AP000720.1-201ENST00000625091 483 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 AL049781.1-201ENST00000623195 3585 ntBASIC2.75□□□□□ -1.97
HLA-DPB1P04440 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 SAGE1-203ENST00000537770 1824 ntAPPRIS ALT2 TSL 5 BASIC2.75□□□□□ -1.97
HLA-DPB1P04440 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 OR5H2-202ENST00000356526 930 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 RNU6-251P-201ENST00000363235 104 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 RNA5SP189-201ENST00000364920 115 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 EQTN-202ENST00000380032 1033 ntAPPRIS P3 TSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 RNU6-730P-201ENST00000383954 104 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 ZNF365-203ENST00000395249 433 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 BOLA3P4-201ENST00000418151 400 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 OFD1P2Y-201ENST00000421895 1149 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AL158156.1-201ENST00000422509 473 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AL390023.1-201ENST00000428836 262 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AL157387.1-201ENST00000436077 335 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC127537.2-201ENST00000439258 465 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 AC024908.1-202ENST00000441907 764 ntTSL 2 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 MRPL42P4-201ENST00000453267 443 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 PABPC1P3-201ENST00000469174 459 ntBASIC2.74□□□□□ -1.97
HLA-DPB1P04440 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC2.74□□□□□ -1.97
HLA-DPB1P04440 TMED11P-201ENST00000479478 690 ntBASIC2.74□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms