Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 AL035404.1-201ENST00000497982 568 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC109927.2-201ENST00000506416 303 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 RNU4ATAC3P-201ENST00000516699 126 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 HMGB1P1-201ENST00000522557 636 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC3.68□□□□□ -1.82
COL2A1P02458 C14orf105-204ENST00000526336 598 ntTSL 4 BASIC3.68□□□□□ -1.82
COL2A1P02458 AC022080.3-201ENST00000544433 482 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 LINC02375-201ENST00000545739 852 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL2A1P02458 LINC01481-201ENST00000552998 629 ntTSL 2 BASIC3.68□□□□□ -1.82
COL2A1P02458 AGGF1P8-201ENST00000562979 1000 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC095057.3-201ENST00000567102 1157 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC135628.1-201ENST00000568867 534 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC010546.1-201ENST00000569391 485 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC3.68□□□□□ -1.82
COL2A1P02458 AP001981.2-201ENST00000603241 418 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.68□□□□□ -1.82
COL2A1P02458 AL603755.1-201ENST00000619504 163 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC092192.1-201ENST00000633154 1018 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC103706.2-201ENST00000638080 240 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 BLM-208ENST00000560509 3966 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL2A1P02458 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC3.68□□□□□ -1.82
COL2A1P02458 TDRD15-201ENST00000405799 6135 ntAPPRIS P1 TSL 2 BASIC3.68□□□□□ -1.82
COL2A1P02458 AL031985.3-201ENST00000565390 2449 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COL2A1P02458 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.68□□□□□ -1.82
COL2A1P02458 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL2A1P02458 CCDC178-204ENST00000403303 3354 ntAPPRIS ALT2 TSL 1 (best) BASIC3.68□□□□□ -1.82
COL2A1P02458 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL2A1P02458 DST-220ENST00000518935 3547 ntTSL 1 (best) BASIC3.68□□□□□ -1.82
COL2A1P02458 ZNF736P9Y-201ENST00000439586 1345 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 AC095050.2-201ENST00000510748 1458 ntBASIC3.68□□□□□ -1.82
COL2A1P02458 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.68□□□□□ -1.82
COL2A1P02458 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.68□□□□□ -1.82
COL2A1P02458 IL21-201ENST00000264497 629 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL2A1P02458 OR5AC2-201ENST00000358642 930 ntAPPRIS P1 BASIC3.67□□□□□ -1.82
COL2A1P02458 RNU5B-1-201ENST00000363286 116 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AL445529.1-201ENST00000398713 389 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL2A1P02458 AL356320.2-201ENST00000417263 507 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 RPL35AP12-201ENST00000425362 338 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AL390023.1-201ENST00000428836 262 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 NANOGP2-201ENST00000435391 727 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 LINC01967-202ENST00000437506 515 ntTSL 5 BASIC3.67□□□□□ -1.82
COL2A1P02458 AC009263.1-201ENST00000441193 1239 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AL353572.1-201ENST00000442490 417 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.67□□□□□ -1.82
COL2A1P02458 BMI1P1-201ENST00000445879 941 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 RPL21P131-201ENST00000497298 483 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC087260.1-201ENST00000546118 401 ntTSL 5 BASIC3.67□□□□□ -1.82
COL2A1P02458 AL135746.1-201ENST00000554205 547 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 AC012378.1-201ENST00000561155 364 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 AC138625.1-201ENST00000567556 483 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 MIR4801-201ENST00000582704 82 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC015688.2-201ENST00000584523 262 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 PRELID3BP8-201ENST00000604148 295 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 RN7SKP299-201ENST00000606679 301 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AP003072.4-201ENST00000624580 310 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC109471.3-201ENST00000625219 233 ntTSL 5 BASIC3.67□□□□□ -1.82
COL2A1P02458 AL137790.1-201ENST00000634283 177 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.67□□□□□ -1.82
COL2A1P02458 AC104662.3-202ENST00000507794 4055 ntTSL 2 BASIC3.67□□□□□ -1.82
COL2A1P02458 AL356489.2-201ENST00000566968 3528 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 ZNF479-202ENST00000331162 2072 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL2A1P02458 TENM1-201ENST00000371130 12875 ntAPPRIS P3 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL2A1P02458 RAP2C-AS1-202ENST00000441399 3473 ntTSL 2 BASIC3.67□□□□□ -1.82
COL2A1P02458 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC3.67□□□□□ -1.82
COL2A1P02458 DEFB112-201ENST00000322246 342 ntAPPRIS P1 TSL 1 (best) BASIC3.67□□□□□ -1.82
COL2A1P02458 KLRF1-202ENST00000354855 838 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL2A1P02458 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL2A1P02458 Z98941.1-201ENST00000407764 100 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC004022.2-201ENST00000413824 193 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 UBE2V1P10-201ENST00000414685 269 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 MTND1P23-201ENST00000416931 372 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC3.67□□□□□ -1.82
COL2A1P02458 AL645465.1-201ENST00000417765 642 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 AL593851.1-201ENST00000426171 157 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 AC078845.1-202ENST00000435996 733 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 HMGB3P11-201ENST00000440127 604 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 TAF9P1-201ENST00000445421 515 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 TPTE2P6-202ENST00000445572 1007 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 LINC01774-201ENST00000453569 595 ntTSL 2 BASIC3.67□□□□□ -1.82
COL2A1P02458 AL391704.1-202ENST00000453889 874 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 FGF7P3-201ENST00000454645 303 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 TAF9P2-201ENST00000454958 515 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC104689.1-201ENST00000473356 768 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 RPS29P26-201ENST00000477483 171 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC3.67□□□□□ -1.82
COL2A1P02458 RPL21P47-201ENST00000483696 477 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.67□□□□□ -1.82
COL2A1P02458 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
COL2A1P02458 AC021087.2-201ENST00000504656 1203 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 AC034244.1-201ENST00000507687 207 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 OR5BM1P-201ENST00000512021 366 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 RNU6-1129P-201ENST00000515964 104 ntBASIC3.67□□□□□ -1.82
COL2A1P02458 RN7SKP5-201ENST00000517045 272 ntBASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 92.7 ms