Protein–RNA interactions for Protein: O95985

TOP3B, DNA topoisomerase 3-beta-1, humanhuman

Known RBP Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3BO95985 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TOP3BO95985 AP1G1-207ENST00000564155 2723 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TOP3BO95985 PRKACB-202ENST00000370682 4288 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
TOP3BO95985 G2E3-201ENST00000206595 5804 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
TOP3BO95985 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC4.33□□□□□ -1.72
TOP3BO95985 AC025125.1-201ENST00000624743 1922 ntBASIC4.33□□□□□ -1.72
TOP3BO95985 LGI1-228ENST00000637689 1802 ntTSL 5 BASIC4.32□□□□□ -1.72
TOP3BO95985 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 EIF2AP4-201ENST00000424793 1781 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC4.32□□□□□ -1.72
TOP3BO95985 AL158163.1-201ENST00000603915 1649 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC4.32□□□□□ -1.72
TOP3BO95985 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 OR5P1P-201ENST00000299512 925 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 AC011155.1-201ENST00000316512 456 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
TOP3BO95985 Y_RNA.25-201ENST00000362528 102 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 RNA5SP130-201ENST00000364431 114 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 RN7SKP226-201ENST00000364912 300 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 WFDC6-202ENST00000372670 620 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 TXNDC8-202ENST00000374510 455 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 Y_RNA.582-201ENST00000391023 95 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 MFAP5-202ENST00000396549 1195 ntTSL 2 BASIC4.32□□□□□ -1.72
TOP3BO95985 MIR1284-201ENST00000408337 120 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 AC092634.6-201ENST00000418558 192 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 AC092647.1-201ENST00000420654 287 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 AL365184.2-201ENST00000431139 435 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 AC010881.1-201ENST00000433830 235 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 AP000477.2-201ENST00000447405 778 ntTSL 3 BASIC4.32□□□□□ -1.72
TOP3BO95985 LINC01510-203ENST00000458082 626 ntTSL 3 BASIC4.32□□□□□ -1.72
TOP3BO95985 AL034349.1-201ENST00000458367 549 ntTSL 5 BASIC4.32□□□□□ -1.72
TOP3BO95985 RPL7P22-201ENST00000466005 733 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 RPL35AP15-201ENST00000468042 339 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 AL121769.1-201ENST00000469473 401 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC4.32□□□□□ -1.72
TOP3BO95985 CSN1S2AP-204ENST00000512167 671 ntTSL 3 BASIC4.32□□□□□ -1.72
TOP3BO95985 AC097467.1-201ENST00000513660 370 ntTSL 5 BASIC4.32□□□□□ -1.72
TOP3BO95985 AC091047.1-201ENST00000533344 552 ntTSL 4 BASIC4.32□□□□□ -1.72
TOP3BO95985 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC4.32□□□□□ -1.72
TOP3BO95985 LINC00520-201ENST00000554186 831 ntTSL 5 BASIC4.32□□□□□ -1.72
TOP3BO95985 AC091691.2-201ENST00000581940 567 ntTSL 4 BASIC4.32□□□□□ -1.72
TOP3BO95985 SEPT7P9-203ENST00000604116 343 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.32□□□□□ -1.72
TOP3BO95985 MIR8059-201ENST00000620427 81 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 AC019278.1-201ENST00000623516 479 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 AC099654.10-201ENST00000640395 161 ntBASIC4.32□□□□□ -1.72
TOP3BO95985 SCN3A-209ENST00000639244 8854 ntTSL 5 BASIC4.32□□□□□ -1.72
TOP3BO95985 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 POLR2B-201ENST00000314595 3748 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 F8-202ENST00000360256 9059 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
TOP3BO95985 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC4.32□□□□□ -1.72
TOP3BO95985 SOBP-204ENST00000618129 1550 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP3BO95985 SYTL2-213ENST00000525702 2727 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP3BO95985 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC4.31□□□□□ -1.72
TOP3BO95985 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP3BO95985 AC106871.1-201ENST00000568324 3102 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 MTND4P29-201ENST00000503122 1372 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 AL157396.1-201ENST00000630034 8444 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP3BO95985 OR6C75-201ENST00000343399 939 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TOP3BO95985 MT-CYB-201ENST00000361789 1141 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
TOP3BO95985 RNA5SP124-201ENST00000362739 110 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 RNA5SP88-201ENST00000365560 109 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 RGS4-201ENST00000367906 930 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP3BO95985 MAPK8-202ENST00000374174 739 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP3BO95985 MIR449B-201ENST00000384995 97 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 MIR181A1-201ENST00000385026 110 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 SNORD115-47-201ENST00000391226 86 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 RPL21P65-201ENST00000406094 466 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 RN7SKP177-201ENST00000410567 355 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 USP9YP6-201ENST00000413550 854 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.31□□□□□ -1.72
TOP3BO95985 GLRXP1-201ENST00000423261 334 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP3BO95985 AC093698.1-201ENST00000423843 571 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 LINC01799-202ENST00000426260 625 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP3BO95985 UTS2B-203ENST00000427544 676 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
TOP3BO95985 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP3BO95985 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC4.31□□□□□ -1.72
TOP3BO95985 UBE2FP3-201ENST00000436366 524 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC4.31□□□□□ -1.72
TOP3BO95985 AC098614.3-201ENST00000438957 440 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.31□□□□□ -1.72
TOP3BO95985 ELOCP23-201ENST00000452014 332 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 USP9YP34-201ENST00000453983 808 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 FGF7P3-201ENST00000454645 303 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
TOP3BO95985 KLF3P2-201ENST00000465138 268 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 RPL29-203ENST00000475248 551 ntAPPRIS P1 TSL 3 BASIC4.31□□□□□ -1.72
TOP3BO95985 RPL7P38-201ENST00000488396 739 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 RPL9P6-201ENST00000492764 598 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 AC084117.1-201ENST00000496975 270 ntTSL 5 BASIC4.31□□□□□ -1.72
TOP3BO95985 AL358832.1-201ENST00000497800 389 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 AC025445.1-201ENST00000502728 300 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 AC025554.1-201ENST00000505641 188 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 AC114781.4-201ENST00000513707 639 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 SNORA74D-201ENST00000516404 141 ntBASIC4.31□□□□□ -1.72
TOP3BO95985 RNU6-314P-201ENST00000516574 104 ntBASIC4.31□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 113.7 ms