Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 NAP1L1P2-201ENST00000414182 1089 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 RPS7P15-201ENST00000415804 584 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AL592402.1-201ENST00000417161 440 ntTSL 4 BASIC4.68□□□□□ -1.66
CNOT4O95628 UQCRBP1-201ENST00000421129 336 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 RGS17P1-201ENST00000423358 553 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC4.68□□□□□ -1.66
CNOT4O95628 LINC01690-201ENST00000424837 576 ntTSL 2 BASIC4.68□□□□□ -1.66
CNOT4O95628 RPS27AP12-201ENST00000429552 465 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 IFNA20P-201ENST00000436840 528 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.68□□□□□ -1.66
CNOT4O95628 Z80107.2-201ENST00000445127 392 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 MRPL48P1-201ENST00000445390 636 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AC073850.1-201ENST00000449243 255 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AL389915.2-201ENST00000454576 441 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AC005062.1-201ENST00000457921 566 ntTSL 3 BASIC4.68□□□□□ -1.66
CNOT4O95628 RNU7-63P-201ENST00000459054 62 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 MRPS17P3-201ENST00000465453 385 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AC233702.1-201ENST00000482905 502 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 RPL38P4-201ENST00000502376 214 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 GYPB-202ENST00000502664 521 ntTSL 1 (best) BASIC4.68□□□□□ -1.66
CNOT4O95628 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.68□□□□□ -1.66
CNOT4O95628 RN7SKP13-201ENST00000515933 244 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.68□□□□□ -1.66
CNOT4O95628 AC104316.1-201ENST00000521258 625 ntTSL 3 BASIC4.68□□□□□ -1.66
CNOT4O95628 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CNOT4O95628 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC4.68□□□□□ -1.66
CNOT4O95628 DAB1-AS1-208ENST00000586465 748 ntTSL 5 BASIC4.68□□□□□ -1.66
CNOT4O95628 AC006504.6-201ENST00000590142 199 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AC005255.1-201ENST00000593748 216 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 AL590235.2-201ENST00000602641 632 ntTSL 5 BASIC4.68□□□□□ -1.66
CNOT4O95628 IGLCOR22-2-201ENST00000605398 313 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 CT45A6-201ENST00000612878 770 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNOT4O95628 AC135068.12-201ENST00000637370 931 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 ZNF480-202ENST00000335090 2722 ntTSL 3 BASIC4.68□□□□□ -1.66
CNOT4O95628 CDH9-201ENST00000231021 3079 ntAPPRIS P1 TSL 1 (best) BASIC4.68□□□□□ -1.66
CNOT4O95628 AC105074.1-201ENST00000623380 3095 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 MAPK10-236ENST00000638313 3971 ntTSL 5 BASIC4.68□□□□□ -1.66
CNOT4O95628 AC011493.1-201ENST00000596753 1632 ntBASIC4.68□□□□□ -1.66
CNOT4O95628 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.68□□□□□ -1.66
CNOT4O95628 SCAF11-212ENST00000549162 3934 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNOT4O95628 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC4.67□□□□□ -1.66
CNOT4O95628 ZNF181-203ENST00000459757 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNOT4O95628 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.67□□□□□ -1.66
CNOT4O95628 MTCO1P9-201ENST00000505577 1534 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNOT4O95628 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CNOT4O95628 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
CNOT4O95628 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.67□□□□□ -1.66
CNOT4O95628 OR51H2P-202ENST00000641424 3046 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC4.67□□□□□ -1.66
CNOT4O95628 Y_RNA.184-201ENST00000363884 108 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 RNA5SP455-201ENST00000365190 119 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 RNU1-106P-201ENST00000384382 164 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 MIR105-1-201ENST00000385222 81 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 ARF4P3-201ENST00000397387 509 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AL136116.1-201ENST00000403591 381 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.67□□□□□ -1.66
CNOT4O95628 VN1R36P-201ENST00000414936 291 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.67□□□□□ -1.66
CNOT4O95628 AC093162.1-201ENST00000419682 124 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AL035404.2-201ENST00000424418 304 ntTSL 3 BASIC4.67□□□□□ -1.66
CNOT4O95628 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC4.67□□□□□ -1.66
CNOT4O95628 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC4.67□□□□□ -1.66
CNOT4O95628 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC4.67□□□□□ -1.66
CNOT4O95628 PSMD10P3-201ENST00000437000 448 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 RPL23AP74-201ENST00000437246 471 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.67□□□□□ -1.66
CNOT4O95628 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC4.67□□□□□ -1.66
CNOT4O95628 AC104651.2-201ENST00000447549 528 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 SLC25A18P1-201ENST00000449385 454 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AC007557.1-201ENST00000451711 541 ntTSL 2 BASIC4.67□□□□□ -1.66
CNOT4O95628 CACYBPP2-201ENST00000453625 678 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 LINC01206-203ENST00000476815 482 ntTSL 3 BASIC4.67□□□□□ -1.66
CNOT4O95628 EIF4EP3-201ENST00000498782 656 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.67□□□□□ -1.66
CNOT4O95628 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC4.67□□□□□ -1.66
CNOT4O95628 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.67□□□□□ -1.66
CNOT4O95628 LNX1-AS1-204ENST00000514364 495 ntTSL 3 BASIC4.67□□□□□ -1.66
CNOT4O95628 RNU6-1220P-201ENST00000517126 108 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 RNU4-60P-201ENST00000517239 135 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AC012400.1-201ENST00000518452 381 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 TRMT10BP1-201ENST00000519377 943 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AP001574.1-201ENST00000519566 546 ntTSL 4 BASIC4.67□□□□□ -1.66
CNOT4O95628 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC4.67□□□□□ -1.66
CNOT4O95628 AP001922.4-201ENST00000526967 290 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 OR4R1P-201ENST00000529879 463 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 KLRF1-203ENST00000537723 598 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
CNOT4O95628 AL352979.2-201ENST00000556988 366 ntTSL 3 BASIC4.67□□□□□ -1.66
CNOT4O95628 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC4.67□□□□□ -1.66
CNOT4O95628 AC093249.1-201ENST00000567049 203 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
CNOT4O95628 AC007151.1-201ENST00000572774 483 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AC006116.3-201ENST00000592968 361 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 RNASEH2B-AS1-202ENST00000593369 648 ntTSL 5 BASIC4.67□□□□□ -1.66
CNOT4O95628 AP000769.2-201ENST00000602344 396 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AC010591.1-201ENST00000603941 649 ntBASIC4.67□□□□□ -1.66
CNOT4O95628 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC4.67□□□□□ -1.66
CNOT4O95628 LINC00649-214ENST00000609132 668 ntTSL 5 BASIC4.67□□□□□ -1.66
CNOT4O95628 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms