Protein–RNA interactions for Protein: O75127

PTCD1, Pentatricopeptide repeat-containing protein 1, mitochondrial, humanhuman

Known RBP Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1O75127 RAD17-201ENST00000282891 2135 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 ZNF611-201ENST00000319783 3153 ntAPPRIS P1 TSL 2 BASIC6.26□□□□□ -1.41
PTCD1O75127 SFT2D2-201ENST00000271375 11040 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PTCD1O75127 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC6.26□□□□□ -1.41
PTCD1O75127 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.25□□□□□ -1.41
PTCD1O75127 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTCD1O75127 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTCD1O75127 SNORD113.2-201ENST00000364166 89 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 SNORD82-201ENST00000365530 70 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 AL356057.3-201ENST00000402607 340 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 RNA5SP345-201ENST00000410646 108 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 RNU6-1148P-201ENST00000410992 104 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 RN7SKP140-201ENST00000411196 284 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 MTCYBP8-201ENST00000422855 651 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 RPEP3-201ENST00000425462 676 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 SRIP2-201ENST00000428470 166 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 AL589935.1-209ENST00000432050 418 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCD1O75127 AL356276.2-201ENST00000435919 558 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 AC006037.1-201ENST00000437967 287 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCD1O75127 RPL7AP61-201ENST00000443410 636 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 TTTY22-201ENST00000445253 427 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTCD1O75127 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCD1O75127 Y_RNA.632-201ENST00000459189 102 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 AP001992.1-205ENST00000462248 379 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 AC021382.1-201ENST00000483523 359 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC6.25□□□□□ -1.41
PTCD1O75127 RNU6-1314P-201ENST00000517139 104 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 SETP2-201ENST00000553886 926 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 SCOCP1-201ENST00000554676 349 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCD1O75127 hsa-mir-3119-1.1-201ENST00000577602 85 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 OR6R2P-201ENST00000609216 300 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 AC068831.8-201ENST00000620171 435 ntBASIC6.25□□□□□ -1.41
PTCD1O75127 OR8A1-203ENST00000641670 5709 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PTCD1O75127 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PTCD1O75127 ZNF704-201ENST00000327835 14386 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTCD1O75127 SLC26A5-207ENST00000393729 2422 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCD1O75127 SYTL2-204ENST00000389958 1943 ntTSL 2 BASIC6.25□□□□□ -1.41
PTCD1O75127 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.25□□□□□ -1.41
PTCD1O75127 ZNF28-204ENST00000457749 4556 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PTCD1O75127 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PTCD1O75127 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCD1O75127 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCD1O75127 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC6.24□□□□□ -1.41
PTCD1O75127 COPS2-203ENST00000542928 1580 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCD1O75127 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCD1O75127 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.24□□□□□ -1.41
PTCD1O75127 AC011155.1-201ENST00000316512 456 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 RNU5E-8P-201ENST00000363502 116 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 Y_RNA.184-201ENST00000363884 108 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 RNU6-1243P-201ENST00000364028 107 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 SNORA33.2-201ENST00000365413 134 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 RNY3P13-201ENST00000365542 102 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 Y_RNA.384-201ENST00000383909 102 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 RNU6-505P-201ENST00000384427 107 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 NDUFB4P5-201ENST00000415445 361 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PTCD1O75127 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCD1O75127 TIMM9P1-201ENST00000436122 256 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 AC093156.1-201ENST00000440382 670 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 DHFRP3-201ENST00000455595 559 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 LINC00971-201ENST00000482721 535 ntTSL 2 BASIC6.24□□□□□ -1.41
PTCD1O75127 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCD1O75127 AC114797.1-201ENST00000514003 728 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 AC093853.1-201ENST00000515689 483 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 RNU4-49P-201ENST00000516080 140 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 AP002444.1-201ENST00000534252 620 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCD1O75127 AC110588.1-201ENST00000559699 137 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCD1O75127 MIR4742-201ENST00000581069 85 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 MIR4503-201ENST00000582187 83 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 AP001029.3-201ENST00000588063 596 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC6.24□□□□□ -1.41
PTCD1O75127 AC104237.2-201ENST00000612456 443 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 MIR6830-201ENST00000636015 70 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 PIGX-211ENST00000639474 777 ntAPPRIS P3 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCD1O75127 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC6.24□□□□□ -1.41
PTCD1O75127 SERPINA7-202ENST00000372563 1600 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
PTCD1O75127 AL592148.3-201ENST00000608771 2646 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 LINC02355-201ENST00000503100 2520 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
PTCD1O75127 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCD1O75127 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC6.24□□□□□ -1.41
PTCD1O75127 ASNSP3-201ENST00000451989 1306 ntBASIC6.24□□□□□ -1.41
PTCD1O75127 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC6.23□□□□□ -1.41
PTCD1O75127 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PTCD1O75127 AC008758.3-201ENST00000507003 1829 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
PTCD1O75127 ELL2P4-201ENST00000446870 1376 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 LARP1BP1-201ENST00000506036 1359 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
PTCD1O75127 OR1S2-201ENST00000302592 978 ntBASIC6.23□□□□□ -1.41
PTCD1O75127 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.23□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 100.7 ms