Protein–RNA interactions for Protein: O60885

BRD4, Bromodomain-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 1,362 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4O60885 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.64□□□□□ -1.83
BRD4O60885 HMGN2P16-201ENST00000456802 261 ntBASIC3.64□□□□□ -1.83
BRD4O60885 RNA5SP385-201ENST00000515947 110 ntBASIC3.64□□□□□ -1.83
BRD4O60885 RNU4-18P-201ENST00000516751 149 ntBASIC3.64□□□□□ -1.83
BRD4O60885 TRAV1-1-201ENST00000542354 392 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
BRD4O60885 AP000462.3-201ENST00000545593 330 ntTSL 5 BASIC3.64□□□□□ -1.83
BRD4O60885 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.64□□□□□ -1.83
BRD4O60885 SNORD53-201ENST00000579969 78 ntBASIC3.64□□□□□ -1.83
BRD4O60885 AC090616.5-202ENST00000582111 297 ntBASIC3.64□□□□□ -1.83
BRD4O60885 AC008764.2-201ENST00000597226 376 ntTSL 5 BASIC3.64□□□□□ -1.83
BRD4O60885 AL158827.2-201ENST00000602494 330 ntBASIC3.64□□□□□ -1.83
BRD4O60885 AL691447.3-201ENST00000635020 330 ntBASIC3.64□□□□□ -1.83
BRD4O60885 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
BRD4O60885 AC103988.1-201ENST00000566382 2177 ntBASIC3.64□□□□□ -1.83
BRD4O60885 AC114316.2-202ENST00000502934 2957 ntTSL 2 BASIC3.64□□□□□ -1.83
BRD4O60885 OSTN-201ENST00000339051 402 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRD4O60885 SAR1AP2-201ENST00000392696 594 ntBASIC3.63□□□□□ -1.83
BRD4O60885 AC004594.1-217ENST00000422260 325 ntTSL 2 BASIC3.63□□□□□ -1.83
BRD4O60885 AC233981.1-201ENST00000423224 461 ntBASIC3.63□□□□□ -1.83
BRD4O60885 AL022310.1-201ENST00000436974 690 ntTSL 2 BASIC3.63□□□□□ -1.83
BRD4O60885 MUPP-201ENST00000438111 566 ntBASIC3.63□□□□□ -1.83
BRD4O60885 LINC00113-203ENST00000442550 572 ntTSL 3 BASIC3.63□□□□□ -1.83
BRD4O60885 RPL23AP15-201ENST00000450202 459 ntBASIC3.63□□□□□ -1.83
BRD4O60885 NCOR1P1-202ENST00000486162 291 ntBASIC3.63□□□□□ -1.83
BRD4O60885 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC3.63□□□□□ -1.83
BRD4O60885 AC008565.1-201ENST00000509046 885 ntBASIC3.63□□□□□ -1.83
BRD4O60885 SAR1B-211ENST00000509937 455 ntTSL 5 BASIC3.63□□□□□ -1.83
BRD4O60885 IGKV3-31-201ENST00000523109 329 ntBASIC3.63□□□□□ -1.83
BRD4O60885 AP003122.3-201ENST00000526316 255 ntBASIC3.63□□□□□ -1.83
BRD4O60885 AC124657.1-201ENST00000527819 429 ntTSL 3 BASIC3.63□□□□□ -1.83
BRD4O60885 C17orf112-201ENST00000623702 835 ntTSL 2 BASIC3.63□□□□□ -1.83
BRD4O60885 LRRC77P-213ENST00000637727 880 ntBASIC3.63□□□□□ -1.83
BRD4O60885 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
BRD4O60885 HELLS-201ENST00000239026 2740 ntTSL 5 BASIC3.63□□□□□ -1.83
BRD4O60885 CNOT6LP1-201ENST00000559681 1462 ntBASIC3.63□□□□□ -1.83
BRD4O60885 ZNF334-205ENST00000615481 3706 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
BRD4O60885 FAM35CP-201ENST00000554755 2470 ntBASIC3.63□□□□□ -1.83
BRD4O60885 OR9G4-204ENST00000641668 2608 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
BRD4O60885 NEB-220ENST00000618972 26307 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
BRD4O60885 U8.2-201ENST00000363156 134 ntBASIC3.63□□□□□ -1.83
BRD4O60885 SNORA3.2-201ENST00000408221 125 ntBASIC3.63□□□□□ -1.83
BRD4O60885 MAGEA8-AS1-201ENST00000427671 476 ntTSL 3 BASIC3.63□□□□□ -1.83
BRD4O60885 SRIP2-201ENST00000428470 166 ntBASIC3.63□□□□□ -1.83
BRD4O60885 RPL23AP33-201ENST00000442301 452 ntBASIC3.63□□□□□ -1.83
BRD4O60885 LAMTOR5P1-201ENST00000444290 270 ntBASIC3.63□□□□□ -1.83
BRD4O60885 HRAT17-201ENST00000447785 547 ntTSL 4 BASIC3.63□□□□□ -1.83
BRD4O60885 ST13P20-201ENST00000447996 1065 ntBASIC3.63□□□□□ -1.83
BRD4O60885 DTHD1-205ENST00000507598 2606 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
BRD4O60885 AC243972.3-201ENST00000539655 198 ntBASIC3.63□□□□□ -1.83
BRD4O60885 LINC02399-201ENST00000547094 400 ntTSL 2 BASIC3.63□□□□□ -1.83
BRD4O60885 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.63□□□□□ -1.83
BRD4O60885 AC005951.1-201ENST00000576706 485 ntBASIC3.63□□□□□ -1.83
BRD4O60885 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC3.63□□□□□ -1.83
BRD4O60885 AP003117.1-201ENST00000602771 554 ntBASIC3.63□□□□□ -1.83
BRD4O60885 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRD4O60885 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRD4O60885 AC004925.1-201ENST00000624256 2706 ntBASIC3.62□□□□□ -1.83
BRD4O60885 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
BRD4O60885 NEB-204ENST00000409198 20637 ntAPPRIS P3 TSL 5 BASIC3.62□□□□□ -1.83
BRD4O60885 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
BRD4O60885 RNU6-600P-201ENST00000362524 99 ntBASIC3.62□□□□□ -1.83
BRD4O60885 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.62□□□□□ -1.83
BRD4O60885 AL117337.1-201ENST00000412789 444 ntTSL 3 BASIC3.62□□□□□ -1.83
BRD4O60885 YPEL5P1-201ENST00000419731 367 ntBASIC3.62□□□□□ -1.83
BRD4O60885 ARL5AP2-201ENST00000444698 533 ntBASIC3.62□□□□□ -1.83
BRD4O60885 RPL36AP33-201ENST00000450395 310 ntBASIC3.62□□□□□ -1.83
BRD4O60885 CACYBPP2-201ENST00000453625 678 ntBASIC3.62□□□□□ -1.83
BRD4O60885 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC3.62□□□□□ -1.83
BRD4O60885 AC089999.1-201ENST00000460336 374 ntBASIC3.62□□□□□ -1.83
BRD4O60885 RPL37P6-202ENST00000464216 403 ntBASIC3.62□□□□□ -1.83
BRD4O60885 KATNBL1P4-201ENST00000503545 918 ntBASIC3.62□□□□□ -1.83
BRD4O60885 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC3.62□□□□□ -1.83
BRD4O60885 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.62□□□□□ -1.83
BRD4O60885 AC046158.1-201ENST00000563408 719 ntTSL 3 BASIC3.62□□□□□ -1.83
BRD4O60885 AC016134.1-201ENST00000565259 701 ntTSL 3 BASIC3.62□□□□□ -1.83
BRD4O60885 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC3.62□□□□□ -1.83
BRD4O60885 MTCO2P22-201ENST00000603246 681 ntBASIC3.62□□□□□ -1.83
BRD4O60885 AC091488.1-201ENST00000604239 660 ntBASIC3.62□□□□□ -1.83
BRD4O60885 AL392112.1-201ENST00000605115 829 ntBASIC3.62□□□□□ -1.83
BRD4O60885 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
BRD4O60885 AL353746.1-201ENST00000566293 6881 ntBASIC3.61□□□□□ -1.83
BRD4O60885 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.61□□□□□ -1.83
BRD4O60885 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
BRD4O60885 RNU6-317P-201ENST00000384031 107 ntBASIC3.61□□□□□ -1.83
BRD4O60885 MIR592-201ENST00000384959 97 ntBASIC3.61□□□□□ -1.83
BRD4O60885 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.61□□□□□ -1.83
BRD4O60885 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.61□□□□□ -1.83
BRD4O60885 AL606490.7-201ENST00000433136 191 ntBASIC3.61□□□□□ -1.83
BRD4O60885 AL590103.1-201ENST00000434488 307 ntBASIC3.61□□□□□ -1.83
BRD4O60885 AC108748.1-201ENST00000487772 515 ntTSL 3 BASIC3.61□□□□□ -1.83
BRD4O60885 SRI-210ENST00000490437 570 ntTSL 2 BASIC3.61□□□□□ -1.83
BRD4O60885 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.61□□□□□ -1.83
BRD4O60885 AC107398.2-201ENST00000508081 601 ntTSL 5 BASIC3.61□□□□□ -1.83
BRD4O60885 AC008837.1-201ENST00000511513 412 ntBASIC3.61□□□□□ -1.83
BRD4O60885 RN7SKP283-201ENST00000517197 270 ntBASIC3.61□□□□□ -1.83
BRD4O60885 UBTFL10-201ENST00000528532 562 ntBASIC3.61□□□□□ -1.83
BRD4O60885 AC055878.1-201ENST00000531858 281 ntTSL 3 BASIC3.61□□□□□ -1.83
BRD4O60885 AL139317.3-202ENST00000555689 528 ntTSL 5 BASIC3.61□□□□□ -1.83
BRD4O60885 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.61□□□□□ -1.83
BRD4O60885 AC023043.3-201ENST00000593113 385 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 113.4 ms