Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 PLS1-211ENST00000497002 2258 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM13O60858 PLCB4-203ENST00000378493 5796 ntAPPRIS ALT1 TSL 2 BASIC4.89□□□□□ -1.63
TRIM13O60858 PANDAR-201ENST00000629595 1506 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM13O60858 Y_RNA.46-201ENST00000362695 102 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 RNU4-44P-201ENST00000363050 141 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 Y_RNA.339-201ENST00000365325 102 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 RNU6-108P-201ENST00000365558 107 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 AL583835.1-201ENST00000399570 407 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 RN7SKP114-201ENST00000410327 279 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 GSTM3P2-201ENST00000412746 530 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 AC127526.1-201ENST00000417526 366 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 FABP7P2-201ENST00000429946 379 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 AC092813.2-201ENST00000434540 399 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.89□□□□□ -1.63
TRIM13O60858 AL161636.2-201ENST00000445179 927 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 HMGB3P22-202ENST00000451823 572 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 RPS4XP10-201ENST00000465034 731 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 AC074124.1-201ENST00000502368 375 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 RNU6-764P-201ENST00000516396 105 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 RNU6-388P-201ENST00000517012 105 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 RNU6-389P-201ENST00000517048 105 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 OR5M2P-201ENST00000529003 936 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 AC027018.1-202ENST00000534723 383 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 LINC02442-201ENST00000537732 343 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 AC007631.1-201ENST00000578545 189 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 AC011824.2-203ENST00000579975 633 ntTSL 3 BASIC4.89□□□□□ -1.63
TRIM13O60858 AC005357.1-201ENST00000588399 301 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 AC011468.4-201ENST00000603942 409 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 AC109309.2-201ENST00000612597 332 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 DLX6-AS1_1.1-201ENST00000621599 180 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 AC104118.1-201ENST00000607625 1589 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM13O60858 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.89□□□□□ -1.63
TRIM13O60858 DHX9P1-201ENST00000436565 3076 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM13O60858 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM13O60858 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.89□□□□□ -1.63
TRIM13O60858 AC009643.2-201ENST00000603543 1448 ntBASIC4.89□□□□□ -1.63
TRIM13O60858 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM13O60858 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM13O60858 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 MAPK10-320ENST00000641462 6696 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM13O60858 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
TRIM13O60858 Y_RNA.176-201ENST00000363815 109 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 Y_RNA.301-201ENST00000364990 103 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 SNORA20.2-201ENST00000383922 131 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 SNORA70.10-201ENST00000384515 134 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 AC092642.1-201ENST00000392417 425 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 ZNF788-202ENST00000397759 777 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
TRIM13O60858 AL592291.1-201ENST00000403830 352 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 RN7SKP293-201ENST00000411389 296 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
TRIM13O60858 AP000695.2-201ENST00000428667 715 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM13O60858 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
TRIM13O60858 ERLEC1P1-201ENST00000433806 578 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 AL354714.3-201ENST00000447284 493 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 AC107072.1-201ENST00000449007 110 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 RPL7AP10-201ENST00000481016 791 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 TM4SF1-AS1-201ENST00000484046 488 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 UBA52P3-201ENST00000491303 382 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 AC097372.3-201ENST00000503593 522 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 AC096711.1-201ENST00000510967 347 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM13O60858 MS4A13-204ENST00000527948 790 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM13O60858 LINC02425-201ENST00000536217 376 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 AC126178.1-201ENST00000548722 926 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM13O60858 AC017100.2-201ENST00000584628 355 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC4.88□□□□□ -1.63
TRIM13O60858 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM13O60858 AC087783.2-201ENST00000605070 562 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 AC245389.1-201ENST00000605141 529 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 BX664608.1-201ENST00000610519 487 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 AL049794.2-201ENST00000616301 365 ntBASIC4.88□□□□□ -1.63
TRIM13O60858 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM13O60858 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM13O60858 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM13O60858 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM13O60858 FAM114A2-210ENST00000520313 1394 ntTSL 2 BASIC4.88□□□□□ -1.63
TRIM13O60858 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM13O60858 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC4.88□□□□□ -1.63
TRIM13O60858 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
TRIM13O60858 ADGRG4-201ENST00000370652 9820 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
TRIM13O60858 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC4.87□□□□□ -1.63
TRIM13O60858 KIAA0586-202ENST00000354386 5226 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
TRIM13O60858 CTAGE5-208ENST00000553352 3441 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM13O60858 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC4.87□□□□□ -1.63
TRIM13O60858 GYPE-201ENST00000358615 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
TRIM13O60858 PSG7-202ENST00000446844 2227 ntAPPRIS P5 TSL 5 BASIC4.87□□□□□ -1.63
TRIM13O60858 RNU6-289P-201ENST00000364093 107 ntBASIC4.87□□□□□ -1.63
TRIM13O60858 MIR514A2-201ENST00000385131 88 ntBASIC4.87□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms