Protein–RNA interactions for Protein: O60493

SNX3, Sorting nexin-3, humanhuman

Predictions only

Length 162 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3O60493 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
SNX3O60493 SPAG17-201ENST00000336338 6924 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNX3O60493 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNX3O60493 RPL23AP57-201ENST00000332361 466 ntBASIC3.5□□□□□ -1.85
SNX3O60493 MT-ND3-201ENST00000361227 346 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SNX3O60493 RNU6-335P-201ENST00000364563 113 ntBASIC3.5□□□□□ -1.85
SNX3O60493 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
SNX3O60493 AL031679.1-201ENST00000400616 525 ntBASIC3.5□□□□□ -1.85
SNX3O60493 RAP1BP1-201ENST00000412709 553 ntBASIC3.5□□□□□ -1.85
SNX3O60493 LINC01048-201ENST00000414480 511 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX3O60493 RPS27AP7-201ENST00000422792 455 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AC019178.2-201ENST00000423595 505 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AC092447.3-201ENST00000426027 686 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AC068287.1-201ENST00000430283 295 ntBASIC3.5□□□□□ -1.85
SNX3O60493 LINC01208-202ENST00000434969 827 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX3O60493 NPM1P49-201ENST00000448027 714 ntBASIC3.5□□□□□ -1.85
SNX3O60493 ARPC3P5-201ENST00000448802 534 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AL135787.1-201ENST00000450154 302 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX3O60493 RPL5P32-201ENST00000454085 879 ntBASIC3.5□□□□□ -1.85
SNX3O60493 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX3O60493 BX322784.1-201ENST00000455793 1077 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AL645608.2-201ENST00000458555 471 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX3O60493 MEMO1P3-201ENST00000459811 302 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AC010618.1-201ENST00000469924 477 ntBASIC3.5□□□□□ -1.85
SNX3O60493 RN7SL594P-201ENST00000470590 287 ntBASIC3.5□□□□□ -1.85
SNX3O60493 RPL31P50-201ENST00000471002 296 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AC068587.2-201ENST00000478386 781 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AC013356.1-201ENST00000489027 564 ntBASIC3.5□□□□□ -1.85
SNX3O60493 SUB1-203ENST00000502897 562 ntAPPRIS P1 TSL 4 BASIC3.5□□□□□ -1.85
SNX3O60493 ACTR3BP4-201ENST00000503033 1244 ntBASIC3.5□□□□□ -1.85
SNX3O60493 KCTD9P5-201ENST00000504141 1170 ntBASIC3.5□□□□□ -1.85
SNX3O60493 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX3O60493 AC006390.1-201ENST00000508068 283 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AC010625.1-201ENST00000511296 403 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AC110751.1-201ENST00000511916 462 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX3O60493 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX3O60493 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SNX3O60493 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
SNX3O60493 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.5□□□□□ -1.85
SNX3O60493 CCDC179-202ENST00000532798 791 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
SNX3O60493 SMILR-201ENST00000533992 553 ntTSL 4 BASIC3.5□□□□□ -1.85
SNX3O60493 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.5□□□□□ -1.85
SNX3O60493 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.5□□□□□ -1.85
SNX3O60493 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX3O60493 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX3O60493 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX3O60493 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX3O60493 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX3O60493 AL596327.1-201ENST00000603629 213 ntBASIC3.5□□□□□ -1.85
SNX3O60493 AC019193.2-201ENST00000610012 634 ntBASIC3.5□□□□□ -1.85
SNX3O60493 C2orf27A-204ENST00000623058 969 ntBASIC3.5□□□□□ -1.85
SNX3O60493 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX3O60493 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC3.5□□□□□ -1.85
SNX3O60493 MACF1-201ENST00000289893 19141 ntTSL 5 BASIC3.5□□□□□ -1.85
SNX3O60493 AL157700.1-201ENST00000561973 1432 ntBASIC3.5□□□□□ -1.85
SNX3O60493 CCDC168-201ENST00000322527 21466 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
SNX3O60493 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
SNX3O60493 MTND5P27-201ENST00000428871 1720 ntBASIC3.5□□□□□ -1.85
SNX3O60493 DDX43P2-201ENST00000604753 1354 ntBASIC3.5□□□□□ -1.85
SNX3O60493 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.49□□□□□ -1.85
SNX3O60493 ANKRD62P1-201ENST00000434304 1623 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC097714.1-201ENST00000511272 1647 ntBASIC3.49□□□□□ -1.85
SNX3O60493 CEP44-201ENST00000296519 4173 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX3O60493 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX3O60493 AL391994.1-201ENST00000254724 282 ntBASIC3.49□□□□□ -1.85
SNX3O60493 PPP1R42-201ENST00000324682 1084 ntAPPRIS P2 TSL 1 (best) BASIC3.49□□□□□ -1.85
SNX3O60493 RNA5SP130-201ENST00000364431 114 ntBASIC3.49□□□□□ -1.85
SNX3O60493 RNU6-343P-201ENST00000364709 104 ntBASIC3.49□□□□□ -1.85
SNX3O60493 SNORD51-201ENST00000384320 80 ntBASIC3.49□□□□□ -1.85
SNX3O60493 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
SNX3O60493 CYCSP45-201ENST00000402289 315 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX3O60493 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX3O60493 MTATP6P27-201ENST00000416987 621 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC004543.1-201ENST00000418764 369 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX3O60493 PTP4A1P5-201ENST00000420305 455 ntBASIC3.49□□□□□ -1.85
SNX3O60493 LINC01468-201ENST00000422763 570 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX3O60493 AC011233.1-201ENST00000422812 283 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AL022400.1-201ENST00000423946 935 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AL606534.3-201ENST00000437499 373 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX3O60493 FTH1P1-201ENST00000437933 532 ntBASIC3.49□□□□□ -1.85
SNX3O60493 MTCYBP31-201ENST00000438855 1122 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AL606662.1-201ENST00000445763 553 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC010655.1-201ENST00000449336 292 ntBASIC3.49□□□□□ -1.85
SNX3O60493 RPL23AP35-201ENST00000451906 501 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX3O60493 RPS4XP15-201ENST00000489210 795 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC110792.1-201ENST00000491826 472 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC023424.2-201ENST00000493479 777 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC078918.1-201ENST00000498515 228 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX3O60493 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.49□□□□□ -1.85
SNX3O60493 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX3O60493 AC011396.1-201ENST00000507391 312 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX3O60493 RNA5SP380-201ENST00000517190 98 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AC068992.1-201ENST00000521411 543 ntTSL 5 BASIC3.49□□□□□ -1.85
SNX3O60493 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX3O60493 AC105180.1-201ENST00000523317 426 ntTSL 3 BASIC3.49□□□□□ -1.85
SNX3O60493 AP004371.1-201ENST00000525240 214 ntBASIC3.49□□□□□ -1.85
SNX3O60493 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC3.49□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 99.8 ms