Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 RAD23BP3-201ENST00000454157 1152 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 MTCO1P42-201ENST00000457379 726 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.72□□□□□ -1.81
ZIC3O60481 AP001025.2-201ENST00000490908 477 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 AC023424.2-201ENST00000493479 777 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 RNU6-405P-201ENST00000516637 110 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.72□□□□□ -1.81
ZIC3O60481 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.72□□□□□ -1.81
ZIC3O60481 AC136188.1-201ENST00000546770 342 ntTSL 3 BASIC3.72□□□□□ -1.81
ZIC3O60481 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC3.72□□□□□ -1.81
ZIC3O60481 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC3.72□□□□□ -1.81
ZIC3O60481 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.72□□□□□ -1.81
ZIC3O60481 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.72□□□□□ -1.81
ZIC3O60481 RPL23AP87-202ENST00000573039 466 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 MIR4458-201ENST00000578872 75 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 AC080078.2-201ENST00000603766 501 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 AC138749.5-201ENST00000611461 208 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 Z99129.1-201ENST00000612510 255 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 AC116165.2-201ENST00000616705 206 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 ZYXP1-201ENST00000617638 118 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC3.72□□□□□ -1.81
ZIC3O60481 AP006248.2-201ENST00000623309 592 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZIC3O60481 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC3.72□□□□□ -1.81
ZIC3O60481 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZIC3O60481 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.72□□□□□ -1.81
ZIC3O60481 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC3.72□□□□□ -1.81
ZIC3O60481 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC3.72□□□□□ -1.81
ZIC3O60481 AP002001.2-201ENST00000529025 1469 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 ARHGEF38-202ENST00000420470 5454 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
ZIC3O60481 MTND5P29-201ENST00000458676 1807 ntBASIC3.72□□□□□ -1.81
ZIC3O60481 C8orf34-203ENST00000348340 3571 ntAPPRIS ALT2 TSL 1 (best) BASIC3.72□□□□□ -1.81
ZIC3O60481 GTDC1-202ENST00000344850 2607 ntAPPRIS P1 TSL 5 BASIC3.72□□□□□ -1.81
ZIC3O60481 SLC17A4-203ENST00000439485 3699 ntTSL 5 BASIC3.72□□□□□ -1.81
ZIC3O60481 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.71□□□□□ -1.81
ZIC3O60481 CDH8-205ENST00000577730 8009 ntTSL 5 BASIC3.71□□□□□ -1.81
ZIC3O60481 CSRNP3-202ENST00000342316 11684 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.81
ZIC3O60481 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ZIC3O60481 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.71□□□□□ -1.82
ZIC3O60481 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.71□□□□□ -1.82
ZIC3O60481 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZIC3O60481 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC3.71□□□□□ -1.82
ZIC3O60481 KLRC3-201ENST00000381903 798 ntAPPRIS P3 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZIC3O60481 SNORA37-201ENST00000384504 129 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 RNU6-297P-201ENST00000384636 107 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 MIR153-1-201ENST00000384914 90 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 MT-TC-201ENST00000387405 66 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.71□□□□□ -1.82
ZIC3O60481 Y_RNA.598-201ENST00000410480 95 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 Y_RNA.599-201ENST00000410489 109 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC3.71□□□□□ -1.82
ZIC3O60481 HSPE1P12-201ENST00000412576 301 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 EIF4EP1-201ENST00000422311 642 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 OR8F1P-201ENST00000425243 930 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 OFD1P13Y-201ENST00000431179 1232 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 HCG2040054-201ENST00000435331 434 ntTSL 3 BASIC3.71□□□□□ -1.82
ZIC3O60481 AL117336.1-201ENST00000439198 380 ntTSL 2 BASIC3.71□□□□□ -1.82
ZIC3O60481 AC006458.1-201ENST00000445093 653 ntTSL 3 BASIC3.71□□□□□ -1.82
ZIC3O60481 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC3.71□□□□□ -1.82
ZIC3O60481 ELOCP30-201ENST00000447108 299 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 RPL29P29-201ENST00000448725 423 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AL590365.1-201ENST00000450788 243 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 HCG17-214ENST00000453558 732 ntTSL 5 BASIC3.71□□□□□ -1.82
ZIC3O60481 RPS20P24-201ENST00000457473 361 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 RPL38P1-201ENST00000460914 211 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 RPL21P103-201ENST00000479921 488 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC034222.1-201ENST00000494052 532 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 LINC02379-201ENST00000505741 300 ntTSL 3 BASIC3.71□□□□□ -1.82
ZIC3O60481 PPBPP1-201ENST00000510807 373 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC010625.1-201ENST00000511296 403 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC3.71□□□□□ -1.82
ZIC3O60481 AC108064.1-201ENST00000513791 460 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 RNU6-720P-201ENST00000516363 108 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 RNU6-1003P-201ENST00000517099 105 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 PAICSP4-201ENST00000517543 1253 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.71□□□□□ -1.82
ZIC3O60481 AC113192.1-201ENST00000527270 321 ntTSL 3 BASIC3.71□□□□□ -1.82
ZIC3O60481 AC022878.1-201ENST00000530684 149 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC3.71□□□□□ -1.82
ZIC3O60481 CENPUP2-201ENST00000555897 1186 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC016987.2-201ENST00000560696 351 ntTSL 3 BASIC3.71□□□□□ -1.82
ZIC3O60481 CYP4A43P-201ENST00000568156 121 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC092138.1-201ENST00000568659 472 ntTSL 2 BASIC3.71□□□□□ -1.82
ZIC3O60481 AL121834.1-201ENST00000572284 509 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 MIR4528-201ENST00000577763 90 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 MIR3160-1-201ENST00000577972 85 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 MTND1P15-201ENST00000579262 949 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC012417.1-201ENST00000582307 1039 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.71□□□□□ -1.82
ZIC3O60481 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.71□□□□□ -1.82
ZIC3O60481 SEPT7P9-203ENST00000604116 343 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC112191.3-201ENST00000604371 277 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AL662844.3-201ENST00000606909 517 ntTSL 5 BASIC3.71□□□□□ -1.82
ZIC3O60481 AC091965.4-201ENST00000607691 587 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC097717.1-249ENST00000608040 401 ntTSL 5 BASIC3.71□□□□□ -1.82
ZIC3O60481 AL109811.3-202ENST00000612387 651 ntTSL 3 BASIC3.71□□□□□ -1.82
ZIC3O60481 AC005332.10-201ENST00000612725 619 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC015540.1-201ENST00000615828 501 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AC099669.2-201ENST00000616549 437 ntBASIC3.71□□□□□ -1.82
ZIC3O60481 AL359715.5-201ENST00000623431 443 ntBASIC3.71□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 98.9 ms