Protein–RNA interactions for Protein: O43707

ACTN4, Alpha-actinin-4, humanhuman

Known RBP Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4O43707 AC098869.1-201ENST00000481627 292 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 AC093815.1-201ENST00000508637 280 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 AL356133.2-201ENST00000521572 371 ntTSL 3 BASIC6.57□□□□□ -1.36
ACTN4O43707 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.57□□□□□ -1.36
ACTN4O43707 STX3-204ENST00000530221 534 ntTSL 5 BASIC6.57□□□□□ -1.36
ACTN4O43707 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.57□□□□□ -1.36
ACTN4O43707 OTX2-203ENST00000554559 715 ntTSL 5 BASIC6.57□□□□□ -1.36
ACTN4O43707 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.57□□□□□ -1.36
ACTN4O43707 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ACTN4O43707 NANOGP3-201ENST00000605855 286 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 AC243654.2-201ENST00000612843 443 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 AL450472.1-202ENST00000637286 180 ntBASIC6.57□□□□□ -1.36
ACTN4O43707 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC6.57□□□□□ -1.36
ACTN4O43707 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.57□□□□□ -1.36
ACTN4O43707 FILIP1L-202ENST00000354552 3970 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 AL358975.1-203ENST00000413352 2932 ntTSL 3 BASIC6.57□□□□□ -1.36
ACTN4O43707 TMEM99-201ENST00000301665 2058 ntAPPRIS P2 TSL 2 BASIC6.57□□□□□ -1.36
ACTN4O43707 CTAGE5-217ENST00000557038 2869 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 AL160286.3-201ENST00000569644 3294 ntTSL 2 BASIC6.57□□□□□ -1.36
ACTN4O43707 SEC22A-201ENST00000309934 4228 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ACTN4O43707 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC6.56□□□□□ -1.36
ACTN4O43707 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 CAPN6-201ENST00000324068 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
ACTN4O43707 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC6.56□□□□□ -1.36
ACTN4O43707 RPGRIP1-201ENST00000382933 2004 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 HTR1F-201ENST00000319595 3140 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
ACTN4O43707 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 MIR613-201ENST00000385248 95 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 RPS4XP7-201ENST00000406274 780 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 LINC00276-201ENST00000417751 596 ntTSL 2 BASIC6.56□□□□□ -1.36
ACTN4O43707 RPL23AP38-201ENST00000423801 469 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 RNU7-120P-201ENST00000459334 63 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC6.56□□□□□ -1.36
ACTN4O43707 RPS29P26-201ENST00000477483 171 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 AC092865.4-201ENST00000477936 615 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 AP000926.1-201ENST00000479573 241 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 RN7SL284P-201ENST00000498823 275 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 LINC02447-203ENST00000504402 292 ntTSL 3 BASIC6.56□□□□□ -1.36
ACTN4O43707 LINC01337-201ENST00000515871 440 ntTSL 3 BASIC6.56□□□□□ -1.36
ACTN4O43707 RN7SKP147-201ENST00000517154 244 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 AC060775.1-201ENST00000518241 520 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 AC011853.1-201ENST00000518911 454 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 AC136777.2-201ENST00000522979 358 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.56□□□□□ -1.36
ACTN4O43707 AC087463.2-201ENST00000565943 472 ntTSL 3 BASIC6.56□□□□□ -1.36
ACTN4O43707 AC138207.8-204ENST00000579588 527 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 AC093227.2-201ENST00000589357 285 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 APOC2-205ENST00000592257 444 ntTSL 3 BASIC6.56□□□□□ -1.36
ACTN4O43707 MZT1P2-201ENST00000604387 248 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 AL022394.1-201ENST00000606979 292 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 PAK3-205ENST00000417227 2196 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 RFX3-204ENST00000382004 9307 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 SEMA3A-201ENST00000265362 8225 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 EEF1A1P36-201ENST00000427807 1351 ntBASIC6.56□□□□□ -1.36
ACTN4O43707 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
ACTN4O43707 LINC01524-201ENST00000428009 4390 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
ACTN4O43707 AC123769.1-201ENST00000530992 3192 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 ZNF107-205ENST00000613690 5589 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
ACTN4O43707 TRPC4-204ENST00000379673 2760 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 AC087516.1-201ENST00000561236 2428 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 Y_RNA.48-201ENST00000362710 103 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 RNU6-946P-201ENST00000383878 107 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.55□□□□□ -1.36
ACTN4O43707 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.55□□□□□ -1.36
ACTN4O43707 GAPDHP48-201ENST00000436626 961 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 LINC01891-201ENST00000439798 538 ntTSL 4 BASIC6.55□□□□□ -1.36
ACTN4O43707 AC005077.1-201ENST00000449226 375 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 CEACAMP6-201ENST00000452007 574 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 NDUFB4P10-201ENST00000452541 359 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 AL138787.2-202ENST00000479395 385 ntTSL 2 BASIC6.55□□□□□ -1.36
ACTN4O43707 RN7SL432P-201ENST00000484057 298 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 AC067942.3-201ENST00000512025 362 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 AC096577.1-202ENST00000515649 448 ntTSL 3 BASIC6.55□□□□□ -1.36
ACTN4O43707 AC103855.3-201ENST00000528445 606 ntTSL 5 BASIC6.55□□□□□ -1.36
ACTN4O43707 AC087441.2-201ENST00000529141 262 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC6.55□□□□□ -1.36
ACTN4O43707 AC009962.1-201ENST00000567327 3813 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 AL158032.1-201ENST00000605401 106 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 AC092266.1-201ENST00000610958 165 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 AL109954.2-201ENST00000611020 530 ntTSL 4 BASIC6.55□□□□□ -1.36
ACTN4O43707 ATG5-207ENST00000613993 733 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 CCR5-201ENST00000292303 3450 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC6.55□□□□□ -1.36
ACTN4O43707 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 CEP85L-201ENST00000360290 1736 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 AC025470.1-201ENST00000510053 2032 ntBASIC6.55□□□□□ -1.36
ACTN4O43707 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 PIGN-247ENST00000640540 4720 ntTSL 5 BASIC6.55□□□□□ -1.36
ACTN4O43707 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC6.55□□□□□ -1.36
ACTN4O43707 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC6.55□□□□□ -1.36
ACTN4O43707 OR51G2-202ENST00000641926 3326 ntAPPRIS P1 BASIC6.55□□□□□ -1.36
ACTN4O43707 CLDN12-203ENST00000394605 3488 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
ACTN4O43707 YTHDC1-207ENST00000579690 2983 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
ACTN4O43707 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 100.6 ms