Protein–RNA interactions for Protein: O15259

NPHP1, Nephrocystin-1, humanhuman

Predictions only

Length 732 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP1O15259 LINC01335-201ENST00000507890 389 ntTSL 3 BASIC4.63□□□□□ -1.67
NPHP1O15259 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC4.63□□□□□ -1.67
NPHP1O15259 RNA5SP208-201ENST00000516156 78 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 HSPA8P13-201ENST00000523715 472 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AP001372.4-201ENST00000524889 472 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AC015771.1-201ENST00000527283 554 ntTSL 4 BASIC4.63□□□□□ -1.67
NPHP1O15259 AC087481.2-201ENST00000565492 330 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AC012182.1-201ENST00000570133 895 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AC022662.1-201ENST00000580252 331 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AC006116.9-201ENST00000591630 649 ntTSL 5 BASIC4.63□□□□□ -1.67
NPHP1O15259 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC4.63□□□□□ -1.67
NPHP1O15259 AL450336.1-201ENST00000605180 586 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AC131235.4-201ENST00000609288 620 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AC025588.4-201ENST00000615802 908 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 C20orf24-208ENST00000639924 351 ntTSL 5 BASIC4.63□□□□□ -1.67
NPHP1O15259 AL133383.2-201ENST00000622958 2336 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 MAPK10-372ENST00000641954 3413 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 AL031985.3-201ENST00000565390 2449 ntBASIC4.63□□□□□ -1.67
NPHP1O15259 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.62□□□□□ -1.67
NPHP1O15259 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.62□□□□□ -1.67
NPHP1O15259 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPHP1O15259 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4.62□□□□□ -1.67
NPHP1O15259 RNU6-1181P-201ENST00000384191 106 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 TRAJ7-201ENST00000390530 59 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
NPHP1O15259 AL592310.1-201ENST00000414330 671 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 SSR1P2-201ENST00000415208 787 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 TIMM9P2-201ENST00000419324 266 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC4.62□□□□□ -1.67
NPHP1O15259 AL049610.1-201ENST00000423374 372 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 SNORA71B-202ENST00000439232 272 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC4.62□□□□□ -1.67
NPHP1O15259 MTND2P19-201ENST00000449129 1012 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AC010655.1-201ENST00000449336 292 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AP001086.1-201ENST00000494882 321 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC4.62□□□□□ -1.67
NPHP1O15259 AC114981.1-201ENST00000503897 678 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AC116353.3-201ENST00000511215 249 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AC109445.1-201ENST00000512356 383 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 RNU6-1073P-201ENST00000517182 106 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC4.62□□□□□ -1.67
NPHP1O15259 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.62□□□□□ -1.67
NPHP1O15259 DIAPH2-AS1-203ENST00000542084 450 ntTSL 5 BASIC4.62□□□□□ -1.67
NPHP1O15259 CACNA1C-AS4-201ENST00000544415 735 ntTSL 3 BASIC4.62□□□□□ -1.67
NPHP1O15259 AC078880.1-201ENST00000546696 553 ntTSL 4 BASIC4.62□□□□□ -1.67
NPHP1O15259 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.62□□□□□ -1.67
NPHP1O15259 PSMA4-206ENST00000558341 719 ntTSL 5 BASIC4.62□□□□□ -1.67
NPHP1O15259 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC4.62□□□□□ -1.67
NPHP1O15259 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC4.62□□□□□ -1.67
NPHP1O15259 AC012669.1-201ENST00000603209 283 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AL163642.2-201ENST00000604722 1019 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AC055876.5-201ENST00000605667 259 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
NPHP1O15259 AL590282.1-201ENST00000610379 1136 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AC091046.2-201ENST00000620775 665 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
NPHP1O15259 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC4.62□□□□□ -1.67
NPHP1O15259 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC4.62□□□□□ -1.67
NPHP1O15259 EXOC5P1-201ENST00000510543 1969 ntBASIC4.62□□□□□ -1.67
NPHP1O15259 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC4.61□□□□□ -1.67
NPHP1O15259 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPHP1O15259 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPHP1O15259 AC004925.1-201ENST00000624256 2706 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPHP1O15259 C2orf78-201ENST00000409561 3045 ntAPPRIS P1 TSL 2 BASIC4.61□□□□□ -1.67
NPHP1O15259 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC4.61□□□□□ -1.67
NPHP1O15259 GSTA3-201ENST00000211122 902 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPHP1O15259 SNORA38.1-201ENST00000364172 131 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC4.61□□□□□ -1.67
NPHP1O15259 LINC00387-201ENST00000422609 458 ntTSL 5 BASIC4.61□□□□□ -1.67
NPHP1O15259 VDAC1P3-201ENST00000434069 851 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 LINC01757-201ENST00000435552 480 ntTSL 2 BASIC4.61□□□□□ -1.67
NPHP1O15259 RPL7P28-201ENST00000437739 740 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC4.61□□□□□ -1.67
NPHP1O15259 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC4.61□□□□□ -1.67
NPHP1O15259 USP9YP25-201ENST00000457708 443 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC4.61□□□□□ -1.67
NPHP1O15259 RPS29P2-201ENST00000479278 136 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AC090453.1-201ENST00000495560 436 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AC026784.1-201ENST00000507986 352 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AC093730.1-201ENST00000508825 448 ntTSL 3 BASIC4.61□□□□□ -1.67
NPHP1O15259 AC010625.1-201ENST00000511296 403 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AC006499.2-201ENST00000513470 337 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.61□□□□□ -1.67
NPHP1O15259 AC084768.1-201ENST00000518926 923 ntTSL 3 BASIC4.61□□□□□ -1.67
NPHP1O15259 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.61□□□□□ -1.67
NPHP1O15259 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.61□□□□□ -1.67
NPHP1O15259 AP000442.2-202ENST00000531311 601 ntTSL 3 BASIC4.61□□□□□ -1.67
NPHP1O15259 AL121766.1-201ENST00000547436 487 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AC126177.3-201ENST00000551839 688 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AC010738.1-201ENST00000604970 987 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 HMGB1P50-201ENST00000605814 607 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AC011816.2-201ENST00000607089 556 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AC128687.2-201ENST00000609657 566 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC4.61□□□□□ -1.67
NPHP1O15259 AC004009.2-201ENST00000623016 728 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 FP475955.2-201ENST00000623720 458 ntTSL 2 BASIC4.61□□□□□ -1.67
NPHP1O15259 AP000553.6-201ENST00000641242 118 ntBASIC4.61□□□□□ -1.67
NPHP1O15259 AGL-206ENST00000370165 7106 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
NPHP1O15259 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
NPHP1O15259 SLC5A3-201ENST00000381151 11576 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 122.3 ms