Protein–RNA interactions for Protein: O14562

UBFD1, Ubiquitin domain-containing protein UBFD1, humanhuman

Known RBP Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1O14562 AC092435.3-201ENST00000565538 3654 ntBASIC2.58□□□□□ -2
UBFD1O14562 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC2.58□□□□□ -2
UBFD1O14562 SKP1-209ENST00000522552 1683 ntAPPRIS ALT1 TSL 1 (best) BASIC2.58□□□□□ -2
UBFD1O14562 ARHGAP28-204ENST00000419673 5492 ntAPPRIS P2 TSL 1 (best) BASIC2.58□□□□□ -2
UBFD1O14562 AL356057.3-201ENST00000402607 340 ntBASIC2.58□□□□□ -2
UBFD1O14562 RN7SKP284-201ENST00000411002 343 ntBASIC2.58□□□□□ -2
UBFD1O14562 RNU4-74P-201ENST00000411280 161 ntBASIC2.58□□□□□ -2
UBFD1O14562 LINC00400-201ENST00000425609 547 ntTSL 3 BASIC2.58□□□□□ -2
UBFD1O14562 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC2.58□□□□□ -2
UBFD1O14562 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.58□□□□□ -2
UBFD1O14562 RN7SKP277-201ENST00000516895 283 ntBASIC2.58□□□□□ -2
UBFD1O14562 RNU6-56P-201ENST00000516986 93 ntBASIC2.58□□□□□ -2
UBFD1O14562 RNU4-60P-201ENST00000517239 135 ntBASIC2.58□□□□□ -2
UBFD1O14562 AC100870.1-201ENST00000522035 505 ntBASIC2.58□□□□□ -2
UBFD1O14562 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.58□□□□□ -2
UBFD1O14562 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC2.58□□□□□ -2
UBFD1O14562 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC2.58□□□□□ -2
UBFD1O14562 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC2.58□□□□□ -2
UBFD1O14562 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.58□□□□□ -2
UBFD1O14562 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.58□□□□□ -2
UBFD1O14562 HMGN2P28-201ENST00000606102 262 ntBASIC2.58□□□□□ -2
UBFD1O14562 BX664608.1-201ENST00000610519 487 ntBASIC2.58□□□□□ -2
UBFD1O14562 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC2.58□□□□□ -2
UBFD1O14562 MTND4P31-201ENST00000425607 1343 ntBASIC2.58□□□□□ -2
UBFD1O14562 ANKRD36BP1-201ENST00000358576 1779 ntBASIC2.58□□□□□ -2
UBFD1O14562 FAM184A-202ENST00000352896 3700 ntAPPRIS ALT1 TSL 1 (best) BASIC2.57□□□□□ -2
UBFD1O14562 MACC1-202ENST00000400331 9159 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
UBFD1O14562 TAB3P1-202ENST00000452645 1634 ntBASIC2.57□□□□□ -2
UBFD1O14562 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.57□□□□□ -2
UBFD1O14562 SNORA25.6-201ENST00000364121 118 ntBASIC2.57□□□□□ -2
UBFD1O14562 UQCRFS1P3-201ENST00000407697 385 ntBASIC2.57□□□□□ -2
UBFD1O14562 RNA5SP21-201ENST00000410917 96 ntBASIC2.57□□□□□ -2
UBFD1O14562 AL139413.1-201ENST00000421309 217 ntBASIC2.57□□□□□ -2
UBFD1O14562 AL645937.1-202ENST00000421799 937 ntBASIC2.57□□□□□ -2
UBFD1O14562 AC241520.1-201ENST00000422654 1099 ntBASIC2.57□□□□□ -2
UBFD1O14562 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC2.57□□□□□ -2
UBFD1O14562 AL353148.1-204ENST00000426752 477 ntTSL 5 BASIC2.57□□□□□ -2
UBFD1O14562 HMGB1P12-201ENST00000438594 598 ntBASIC2.57□□□□□ -2
UBFD1O14562 AC000041.1-201ENST00000439655 175 ntBASIC2.57□□□□□ -2
UBFD1O14562 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC2.57□□□□□ -2
UBFD1O14562 TTTY19-201ENST00000453955 269 ntTSL 1 (best) BASIC2.57□□□□□ -2
UBFD1O14562 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC2.57□□□□□ -2
UBFD1O14562 AC008571.1-201ENST00000467232 300 ntBASIC2.57□□□□□ -2
UBFD1O14562 NCOR1P1-202ENST00000486162 291 ntBASIC2.57□□□□□ -2
UBFD1O14562 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.57□□□□□ -2
UBFD1O14562 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC2.57□□□□□ -2
UBFD1O14562 AC112695.1-201ENST00000504213 592 ntTSL 2 BASIC2.57□□□□□ -2
UBFD1O14562 AC002460.1-201ENST00000504394 370 ntTSL 3 BASIC2.57□□□□□ -2
UBFD1O14562 MTCO1P31-201ENST00000506355 492 ntBASIC2.57□□□□□ -2
UBFD1O14562 TBCAP3-201ENST00000512475 312 ntBASIC2.57□□□□□ -2
UBFD1O14562 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC2.57□□□□□ -2
UBFD1O14562 AC027031.1-201ENST00000517318 489 ntTSL 3 BASIC2.57□□□□□ -2
UBFD1O14562 IGLVIV-66-1-201ENST00000521832 460 ntBASIC2.57□□□□□ -2
UBFD1O14562 AC087276.1-201ENST00000529659 480 ntBASIC2.57□□□□□ -2
UBFD1O14562 KBTBD3-204ENST00000531482 874 ntTSL 3 BASIC2.57□□□□□ -2
UBFD1O14562 MAL2-203ENST00000534619 578 ntTSL 4 BASIC2.57□□□□□ -2
UBFD1O14562 POLR2KP1-201ENST00000553226 168 ntBASIC2.57□□□□□ -2
UBFD1O14562 AL359237.1-201ENST00000554305 826 ntTSL 5 BASIC2.57□□□□□ -2
UBFD1O14562 AL132819.1-201ENST00000555595 208 ntTSL 3 BASIC2.57□□□□□ -2
UBFD1O14562 GTF3AP2-201ENST00000557014 266 ntBASIC2.57□□□□□ -2
UBFD1O14562 ALDH3A2-208ENST00000571163 590 ntTSL 5 BASIC2.57□□□□□ -2
UBFD1O14562 AC005695.2-201ENST00000579641 259 ntTSL 3 BASIC2.57□□□□□ -2
UBFD1O14562 MIR4672-201ENST00000583126 81 ntBASIC2.57□□□□□ -2
UBFD1O14562 AC011524.2-201ENST00000589198 399 ntTSL 3 BASIC2.57□□□□□ -2
UBFD1O14562 AL160237.3-201ENST00000604114 1013 ntBASIC2.57□□□□□ -2
UBFD1O14562 AP003485.2-201ENST00000623636 610 ntBASIC2.57□□□□□ -2
UBFD1O14562 AL049737.1-201ENST00000413920 1403 ntBASIC2.57□□□□□ -2
UBFD1O14562 AL136360.1-201ENST00000503377 1900 ntBASIC2.56□□□□□ -2
UBFD1O14562 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.56□□□□□ -2
UBFD1O14562 TAS2R10-201ENST00000240619 1042 ntAPPRIS P1 BASIC2.56□□□□□ -2
UBFD1O14562 MIR449A-201ENST00000362113 91 ntBASIC2.56□□□□□ -2
UBFD1O14562 Z86062.1-201ENST00000406773 777 ntBASIC2.56□□□□□ -2
UBFD1O14562 AL512504.1-201ENST00000415494 778 ntBASIC2.56□□□□□ -2
UBFD1O14562 AC069257.1-202ENST00000425275 422 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 AL513175.1-201ENST00000431492 780 ntBASIC2.56□□□□□ -2
UBFD1O14562 HMGB1P45-201ENST00000435986 653 ntBASIC2.56□□□□□ -2
UBFD1O14562 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 CLEC5A-202ENST00000438351 743 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 EIF4E-208ENST00000505992 898 ntTSL 5 BASIC2.56□□□□□ -2
UBFD1O14562 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 AC008494.2-201ENST00000514544 370 ntBASIC2.56□□□□□ -2
UBFD1O14562 RNA5SP356-201ENST00000515972 94 ntBASIC2.56□□□□□ -2
UBFD1O14562 LY96-202ENST00000518893 430 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 IGHVII-62-1-201ENST00000519283 235 ntBASIC2.56□□□□□ -2
UBFD1O14562 HMGB1P46-201ENST00000520062 610 ntBASIC2.56□□□□□ -2
UBFD1O14562 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC2.56□□□□□ -2
UBFD1O14562 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 MIR4435-1-201ENST00000582552 80 ntBASIC2.56□□□□□ -2
UBFD1O14562 AC245128.3-201ENST00000594721 748 ntBASIC2.56□□□□□ -2
UBFD1O14562 TEX41-222ENST00000597173 1134 ntTSL 1 (best) BASIC2.56□□□□□ -2
UBFD1O14562 AC096947.1-201ENST00000603233 470 ntBASIC2.56□□□□□ -2
UBFD1O14562 AC136601.2-201ENST00000604356 474 ntBASIC2.56□□□□□ -2
UBFD1O14562 AL033523.1-201ENST00000605153 153 ntBASIC2.56□□□□□ -2
UBFD1O14562 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC2.56□□□□□ -2
UBFD1O14562 LINC01021-204ENST00000512067 1610 ntTSL 1 (best) BASIC2.56□□□□□ -2
UBFD1O14562 MTND5P3-201ENST00000438536 1800 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 228.2 ms