Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RNU6-244P-201ENST00000391028 104 ntBASIC4.48□□□□□ -1.69
CUX2O14529 NPM1P10-201ENST00000398310 865 ntBASIC4.48□□□□□ -1.69
CUX2O14529 AL512430.2-201ENST00000406786 339 ntBASIC4.48□□□□□ -1.69
CUX2O14529 TRGV6-201ENST00000417928 299 ntBASIC4.48□□□□□ -1.69
CUX2O14529 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC4.48□□□□□ -1.69
CUX2O14529 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC4.48□□□□□ -1.69
CUX2O14529 ELOCP10-201ENST00000440624 327 ntBASIC4.48□□□□□ -1.69
CUX2O14529 MLIP-IT1-201ENST00000441845 643 ntTSL 2 BASIC4.48□□□□□ -1.69
CUX2O14529 TAF9P1-201ENST00000445421 515 ntBASIC4.48□□□□□ -1.69
CUX2O14529 TAF9P2-201ENST00000454958 515 ntBASIC4.48□□□□□ -1.69
CUX2O14529 AC234781.5-201ENST00000508429 271 ntBASIC4.48□□□□□ -1.69
CUX2O14529 AC093770.1-201ENST00000511559 571 ntBASIC4.48□□□□□ -1.69
CUX2O14529 AL161896.1-201ENST00000597248 508 ntTSL 4 BASIC4.48□□□□□ -1.69
CUX2O14529 ELOCP34-201ENST00000604436 327 ntBASIC4.48□□□□□ -1.69
CUX2O14529 EFCAB3-202ENST00000450662 1694 ntTSL 5 BASIC4.47□□□□□ -1.69
CUX2O14529 NBPF20-201ENST00000369373 18760 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
CUX2O14529 MIR337-201ENST00000362281 93 ntBASIC4.47□□□□□ -1.69
CUX2O14529 SNORA70E-201ENST00000384492 135 ntBASIC4.47□□□□□ -1.69
CUX2O14529 MIR320B1-201ENST00000390209 79 ntBASIC4.47□□□□□ -1.69
CUX2O14529 AL365277.2-201ENST00000415255 551 ntTSL 3 BASIC4.47□□□□□ -1.69
CUX2O14529 MTCO3P21-201ENST00000430791 643 ntBASIC4.47□□□□□ -1.69
CUX2O14529 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC4.47□□□□□ -1.69
CUX2O14529 ST13P20-201ENST00000447996 1065 ntBASIC4.47□□□□□ -1.69
CUX2O14529 AL662889.1-201ENST00000453572 389 ntTSL 3 BASIC4.47□□□□□ -1.69
CUX2O14529 AL049870.4-201ENST00000555741 486 ntBASIC4.47□□□□□ -1.69
CUX2O14529 AC012467.1-201ENST00000607740 256 ntBASIC4.47□□□□□ -1.69
CUX2O14529 AC009318.2-201ENST00000610917 651 ntBASIC4.47□□□□□ -1.69
CUX2O14529 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC4.47□□□□□ -1.69
CUX2O14529 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.47□□□□□ -1.69
CUX2O14529 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
CUX2O14529 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
CUX2O14529 SNORA25.9-201ENST00000365087 128 ntBASIC4.46□□□□□ -1.7
CUX2O14529 RNU6-883P-201ENST00000384597 107 ntBASIC4.46□□□□□ -1.7
CUX2O14529 HMGN1P5-201ENST00000448591 263 ntBASIC4.46□□□□□ -1.7
CUX2O14529 RN7SKP43-201ENST00000516173 320 ntBASIC4.46□□□□□ -1.7
CUX2O14529 MRPL51-203ENST00000538814 501 ntTSL 2 BASIC4.46□□□□□ -1.7
CUX2O14529 CKS1BP1-201ENST00000555221 240 ntBASIC4.46□□□□□ -1.7
CUX2O14529 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC4.46□□□□□ -1.7
CUX2O14529 AL109809.4-201ENST00000603520 2185 ntBASIC4.46□□□□□ -1.7
CUX2O14529 AL450326.2-201ENST00000421913 1962 ntBASIC4.46□□□□□ -1.7
CUX2O14529 KIAA0586-209ENST00000556134 5912 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
CUX2O14529 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CUX2O14529 AL356292.1-201ENST00000283110 373 ntBASIC4.45□□□□□ -1.7
CUX2O14529 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CUX2O14529 MTND4LP7-201ENST00000431728 294 ntBASIC4.45□□□□□ -1.7
CUX2O14529 RPS29P6-201ENST00000438196 145 ntBASIC4.45□□□□□ -1.7
CUX2O14529 RPL21P41-201ENST00000459863 264 ntBASIC4.45□□□□□ -1.7
CUX2O14529 LINC02027-201ENST00000482617 596 ntTSL 5 BASIC4.45□□□□□ -1.7
CUX2O14529 OR9N1P-202ENST00000494289 481 ntBASIC4.45□□□□□ -1.7
CUX2O14529 AC021146.5-201ENST00000503544 545 ntBASIC4.45□□□□□ -1.7
CUX2O14529 LINC02465-201ENST00000507099 532 ntTSL 4 BASIC4.45□□□□□ -1.7
CUX2O14529 RNU6-362P-201ENST00000516736 90 ntBASIC4.45□□□□□ -1.7
CUX2O14529 RNA5SP480-201ENST00000516840 109 ntBASIC4.45□□□□□ -1.7
CUX2O14529 RN7SKP96-201ENST00000516948 297 ntBASIC4.45□□□□□ -1.7
CUX2O14529 RNA5SP380-201ENST00000517190 98 ntBASIC4.45□□□□□ -1.7
CUX2O14529 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC4.45□□□□□ -1.7
CUX2O14529 AC008083.2-201ENST00000546707 476 ntBASIC4.45□□□□□ -1.7
CUX2O14529 AC068714.1-201ENST00000559623 800 ntBASIC4.45□□□□□ -1.7
CUX2O14529 AC106796.1-201ENST00000577173 615 ntTSL 3 BASIC4.45□□□□□ -1.7
CUX2O14529 AC016493.1-201ENST00000586106 688 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CUX2O14529 AC123786.2-201ENST00000603459 275 ntBASIC4.45□□□□□ -1.7
CUX2O14529 AP004247.3-201ENST00000608682 624 ntBASIC4.45□□□□□ -1.7
CUX2O14529 AL162233.1-201ENST00000620014 944 ntBASIC4.45□□□□□ -1.7
CUX2O14529 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CUX2O14529 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC4.45□□□□□ -1.7
CUX2O14529 PI15-201ENST00000260113 6732 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CUX2O14529 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CUX2O14529 STX7-202ENST00000367941 15791 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CUX2O14529 RTKN2-202ENST00000373789 6641 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CUX2O14529 OR5T3-201ENST00000303059 1023 ntBASIC4.44□□□□□ -1.7
CUX2O14529 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CUX2O14529 RNU4-31P-201ENST00000384211 141 ntBASIC4.44□□□□□ -1.7
CUX2O14529 MIR1183-201ENST00000408856 89 ntBASIC4.44□□□□□ -1.7
CUX2O14529 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.44□□□□□ -1.7
CUX2O14529 AP000233.1-201ENST00000426609 291 ntTSL 3 BASIC4.44□□□□□ -1.7
CUX2O14529 Z82205.1-201ENST00000428456 297 ntBASIC4.44□□□□□ -1.7
CUX2O14529 C1orf143-201ENST00000443836 762 ntTSL 2 BASIC4.44□□□□□ -1.7
CUX2O14529 AC093663.2-201ENST00000484625 313 ntBASIC4.44□□□□□ -1.7
CUX2O14529 RN7SKP24-201ENST00000515888 284 ntBASIC4.44□□□□□ -1.7
CUX2O14529 RNU6-347P-201ENST00000516658 105 ntBASIC4.44□□□□□ -1.7
CUX2O14529 IGHVIII-38-1-201ENST00000521454 282 ntBASIC4.44□□□□□ -1.7
CUX2O14529 AC023158.1-201ENST00000561632 1025 ntBASIC4.44□□□□□ -1.7
CUX2O14529 C16orf97-203ENST00000566314 281 ntTSL 3 BASIC4.44□□□□□ -1.7
CUX2O14529 ZNF861P-201ENST00000588126 639 ntBASIC4.44□□□□□ -1.7
CUX2O14529 AC090771.2-201ENST00000588794 571 ntTSL 3 BASIC4.44□□□□□ -1.7
CUX2O14529 RPP40P2-201ENST00000603596 712 ntBASIC4.44□□□□□ -1.7
CUX2O14529 SUMO2P14-201ENST00000604488 293 ntBASIC4.44□□□□□ -1.7
CUX2O14529 AC011472.4-201ENST00000615848 491 ntBASIC4.44□□□□□ -1.7
CUX2O14529 DDX18P3-201ENST00000404856 2007 ntBASIC4.44□□□□□ -1.7
CUX2O14529 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC4.44□□□□□ -1.7
CUX2O14529 ZNF639-210ENST00000621687 1458 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CUX2O14529 MIR26A1-201ENST00000362205 77 ntBASIC4.43□□□□□ -1.7
CUX2O14529 CR848007.2-201ENST00000424918 787 ntBASIC4.43□□□□□ -1.7
CUX2O14529 ELOCP13-201ENST00000443934 329 ntBASIC4.43□□□□□ -1.7
CUX2O14529 GPC6-AS2-201ENST00000445540 587 ntTSL 5 BASIC4.43□□□□□ -1.7
CUX2O14529 RPL34P26-201ENST00000445636 354 ntBASIC4.43□□□□□ -1.7
CUX2O14529 AC013476.1-201ENST00000446709 537 ntTSL 4 BASIC4.43□□□□□ -1.7
CUX2O14529 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC4.43□□□□□ -1.7
CUX2O14529 RPL23AP31-201ENST00000456160 467 ntBASIC4.43□□□□□ -1.7
CUX2O14529 RNU6-1218P-201ENST00000458990 108 ntBASIC4.43□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 111 ms