Protein–RNA interactions for Protein: E9PIF3

NPIPA2, Nuclear pore complex-interacting protein family member A2, humanhuman

Predictions only

Length 369 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA2E9PIF3 Y_RNA.408-201ENST00000383987 102 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 ARF4P3-201ENST00000397387 509 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 C1GALT1-202ENST00000402468 930 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 RNA5SP129-201ENST00000410276 118 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 BX842559.1-201ENST00000419615 532 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC245054.1-201ENST00000420944 258 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 MRPS36P1-201ENST00000421291 307 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 RPL7P44-201ENST00000424827 742 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 LINC01611-201ENST00000428896 477 ntTSL 5 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 USP9YP22-201ENST00000438971 294 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 VN1R10P-201ENST00000447106 875 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 HMGB1P15-201ENST00000453854 435 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 PNPLA4P1-201ENST00000458328 305 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC108734.3-201ENST00000481241 1165 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC074250.1-201ENST00000511117 192 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC021146.1-201ENST00000511202 716 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 RN7SKP13-201ENST00000515933 244 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC087439.2-201ENST00000519498 552 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC027309.2-201ENST00000520566 192 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 ARL1-211ENST00000551828 776 ntTSL 5 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC096577.2-201ENST00000611455 153 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AL450489.1-201ENST00000612071 468 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC024257.5-201ENST00000612739 531 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC005332.6-201ENST00000613178 446 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC016597.2-201ENST00000613256 341 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC231759.1-201ENST00000616455 597 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC243585.2-201ENST00000619099 508 ntTSL 3 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AL121895.2-201ENST00000619558 447 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 RBM12B-AS1-201ENST00000623283 653 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC040168.1-201ENST00000623594 991 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC244258.1-201ENST00000637553 1071 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 AC011139.1-202ENST00000637744 563 ntTSL 5 BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 MKKS-204ENST00000639674 192 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 LINC02211-204ENST00000642024 1070 ntBASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
NPIPA2E9PIF3 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC109315.1-201ENST00000584143 1347 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 ZNF280D-201ENST00000267807 4328 ntAPPRIS P3 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 ZNF29P-201ENST00000225587 168 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 RNU6-50P-201ENST00000362356 103 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 RNU5D-1-201ENST00000363299 116 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 RNA5SP50-201ENST00000363731 107 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 SNRPEP2-201ENST00000397592 279 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC097717.1-228ENST00000417006 754 ntTSL 3 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 RPL23AP83-201ENST00000434984 473 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC004854.1-201ENST00000440356 349 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AL009048.1-201ENST00000450437 298 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AL365318.1-201ENST00000453128 705 ntTSL 3 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 snoU13.4-201ENST00000458916 104 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 RPS27AP1-201ENST00000475545 471 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC012181.1-201ENST00000479895 423 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 RPL23AP44-201ENST00000482216 473 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 ARNTL2-AS1-201ENST00000500498 804 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC004062.1-201ENST00000509926 645 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC010265.1-201ENST00000513509 211 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC022679.1-202ENST00000520251 376 ntTSL 3 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AL139174.1-201ENST00000531489 886 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC068643.2-201ENST00000547418 852 ntTSL 5 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 JKAMP-212ENST00000556985 592 ntTSL 2 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC087481.2-201ENST00000565492 330 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC104564.2-201ENST00000581240 270 ntTSL 3 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC006116.10-201ENST00000591836 581 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC020914.6-201ENST00000594327 272 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AL161756.2-201ENST00000604597 246 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC069545.1-201ENST00000605671 358 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC011816.2-201ENST00000607089 556 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 MUCL1-205ENST00000619042 243 ntAPPRIS ALT2 TSL 5 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC022960.3-201ENST00000619794 441 ntBASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 AC092017.3-201ENST00000638880 536 ntAPPRIS P1 TSL 5 BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 BIRC3-201ENST00000263464 5197 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC3.28□□□□□ -1.88
NPIPA2E9PIF3 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC3.28□□□□□ -1.89
NPIPA2E9PIF3 ADAM29-211ENST00000514159 3010 ntAPPRIS P1 TSL 4 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 AC107982.1-201ENST00000507171 1300 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 C9orf72-202ENST00000379997 1873 ntTSL 2 BASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 Y_RNA.25-201ENST00000362528 102 ntBASIC3.27□□□□□ -1.89
NPIPA2E9PIF3 CRP-202ENST00000368110 667 ntTSL 3 BASIC3.27□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms