Protein–RNA interactions for Protein: A7MD48

SRRM4, Serine/arginine repetitive matrix protein 4, humanhuman

Known RBP Predictions only

Length 611 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4A7MD48 AC116535.2-201ENST00000532365 441 ntTSL 5 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 RFPL1S-203ENST00000539579 330 ntBASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 YPEL5P3-201ENST00000547227 352 ntBASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 TMEM87A-212ENST00000568432 750 ntTSL 3 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC136618.2-201ENST00000575091 400 ntBASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC037487.2-201ENST00000581796 537 ntTSL 3 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC006116.8-203ENST00000587448 465 ntTSL 3 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC010320.2-202ENST00000599125 595 ntTSL 4 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC025946.2-201ENST00000603398 234 ntBASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC020910.2-201ENST00000603635 610 ntBASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC084782.3-201ENST00000612282 578 ntBASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 AC015967.1-201ENST00000619893 476 ntBASIC3.16□□□□□ -1.9
SRRM4A7MD48 CCL14-203ENST00000620991 426 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SRRM4A7MD48 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC3.16□□□□□ -1.9
SRRM4A7MD48 THEMIS-202ENST00000368250 4101 ntAPPRIS P3 TSL 5 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.16□□□□□ -1.9
SRRM4A7MD48 ATF2-221ENST00000538946 1325 ntTSL 5 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.16□□□□□ -1.9
SRRM4A7MD48 OR10AG1-202ENST00000641071 2807 ntAPPRIS P1 BASIC3.15□□□□□ -1.9
SRRM4A7MD48 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.9
SRRM4A7MD48 ST7-221ENST00000465133 2155 ntTSL 5 BASIC3.15□□□□□ -1.9
SRRM4A7MD48 TMCO5A-203ENST00000558158 2894 ntAPPRIS ALT2 TSL 3 BASIC3.15□□□□□ -1.9
SRRM4A7MD48 GABPAP-201ENST00000419271 1356 ntBASIC3.15□□□□□ -1.9
SRRM4A7MD48 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC3.15□□□□□ -1.9
SRRM4A7MD48 MTCO1P9-201ENST00000505577 1534 ntBASIC3.15□□□□□ -1.9
SRRM4A7MD48 RLIMP1-201ENST00000339626 1680 ntBASIC3.15□□□□□ -1.9
SRRM4A7MD48 AL645937.1-201ENST00000641739 1652 ntBASIC3.15□□□□□ -1.9
SRRM4A7MD48 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 PMCH-201ENST00000329406 766 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRRM4A7MD48 RNA5SP443-201ENST00000363083 132 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 Y_RNA.234-201ENST00000364409 97 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 RNA5SP88-201ENST00000365560 109 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 PLG-203ENST00000366924 1166 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRRM4A7MD48 CD2-201ENST00000369477 478 ntTSL 2 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.15□□□□□ -1.91
SRRM4A7MD48 SNORD116-2-201ENST00000384274 95 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 SNORD116-6-201ENST00000384711 96 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 CXADR-203ENST00000400165 603 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AL049545.1-201ENST00000401856 572 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 MIR1305-201ENST00000408300 86 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 RNA5SP129-201ENST00000410276 118 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 RNU4-6P-201ENST00000410804 122 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 LINC02089-201ENST00000412360 682 ntTSL 2 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC098484.2-201ENST00000414339 601 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRRM4A7MD48 LINC01198-201ENST00000416521 500 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC127526.1-201ENST00000417526 366 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AL807761.1-201ENST00000417622 171 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 TOMM22P1-201ENST00000418578 312 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC004946.1-201ENST00000421825 751 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 RPS6P15-201ENST00000431996 751 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 UBE2V1P13-201ENST00000436983 439 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC108734.1-201ENST00000439549 399 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC019330.1-202ENST00000440609 504 ntTSL 4 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC009950.1-206ENST00000445199 517 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 DIAPH2-AS1-202ENST00000445414 606 ntTSL 2 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 MTCYBP3-201ENST00000445588 1137 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AL391427.1-201ENST00000451575 425 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 Z98749.1-201ENST00000454123 541 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC234775.1-201ENST00000454247 670 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 HMGN2P7-201ENST00000456186 273 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 UBDP1-202ENST00000457888 382 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 RPL9P32-201ENST00000464118 620 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AHI1-208ENST00000488690 712 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AP001025.2-201ENST00000490908 477 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AL132838.2-201ENST00000492041 314 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 RPL7P23-201ENST00000493874 747 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 RPL23AP55-201ENST00000498163 452 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 PARP8-211ENST00000505554 3825 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 BTF3L4P4-201ENST00000506381 449 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 ADGRL3-AS1-203ENST00000506704 606 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 TEMN3-AS1-201ENST00000510211 401 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 ERAP2-205ENST00000510309 1275 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC093534.2-201ENST00000511418 420 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 HHIP-AS1-203ENST00000512359 646 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 RNA5SP143-201ENST00000516936 115 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC099805.1-203ENST00000518177 773 ntTSL 2 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC087369.1-201ENST00000520775 996 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 NAP1L1P1-201ENST00000524793 1063 ntBASIC3.15□□□□□ -1.91
SRRM4A7MD48 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AHI1-212ENST00000528103 441 ntTSL 1 (best) BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC009292.2-201ENST00000558889 291 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC090403.1-205ENST00000580883 516 ntTSL 2 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 NDUFV2-AS1-202ENST00000583081 399 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 RPS4XP16-203ENST00000596904 698 ntTSL 5 BASIC3.15□□□□□ -1.91
SRRM4A7MD48 AC021171.1-201ENST00000603137 706 ntBASIC3.15□□□□□ -1.91
Retrieved 100 of 98,524 protein–RNA pairs in 122.9 ms