Protein–RNA interactions for Protein: A6NIU2

LINC01549, Putative uncharacterized protein encoded by LINC01549, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549A6NIU2 RNA5SP341-201ENST00000516261 117 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AC021269.2-201ENST00000532318 330 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AL121603.1-201ENST00000553815 142 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AL049874.4-201ENST00000557593 255 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 MIR4443-201ENST00000585052 53 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 UBE2Q2P2-203ENST00000613592 761 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AL160394.1-201ENST00000624765 724 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 ABBA01000935.2-201ENST00000637477 838 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 PSMD5-AS1-215ENST00000640622 205 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 MTND5P1-201ENST00000445440 1375 ntBASIC1.57□□□□□ -2.16
LINC01549A6NIU2 LUZP4-201ENST00000371920 1701 ntAPPRIS P2 TSL 1 (best) BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 SMARCAD1-201ENST00000354268 4912 ntAPPRIS P3 TSL 1 (best) BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 CASC1-205ENST00000545133 2146 ntAPPRIS ALT2 TSL 2 BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC1.57□□□□□ -2.16
LINC01549A6NIU2 AC090740.1-201ENST00000623193 2262 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AC009487.4-201ENST00000624969 3585 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AL359851.1-201ENST00000569460 4997 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 ANKRD36P1-201ENST00000344424 659 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 OR5H15-201ENST00000383696 930 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 SNORA6-201ENST00000384033 151 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 U3.40-201ENST00000408706 208 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 CCDC126-203ENST00000410069 890 ntAPPRIS P1 TSL 1 (best) BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 RAB28P1-201ENST00000411517 641 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 PSMA2P3-201ENST00000429685 675 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 MYL8P-204ENST00000431574 518 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 SMG7-AS1-202ENST00000432837 466 ntTSL 3 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 RPS15AP28-201ENST00000435088 386 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 H2AFZP6-201ENST00000444403 394 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AP000936.2-201ENST00000447151 681 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 RPL23AP49-201ENST00000492925 468 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AC093752.2-201ENST00000506942 573 ntTSL 5 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 HMGB1P23-201ENST00000518743 568 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AC012435.2-201ENST00000562869 361 ntTSL 3 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 MIR4700-201ENST00000578311 74 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AC106028.5-201ENST00000610332 395 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AC084757.4-201ENST00000616350 526 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AL356274.1-201ENST00000617064 410 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AC068831.8-201ENST00000620171 435 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 AC007275.1-201ENST00000621243 671 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 MIR203B-201ENST00000636080 86 ntBASIC1.56□□□□□ -2.16
LINC01549A6NIU2 RTL4-201ENST00000340433 2613 ntAPPRIS P1 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 SEL1L2-201ENST00000284951 2224 ntAPPRIS P1 TSL 5 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC1.56□□□□□ -2.16
LINC01549A6NIU2 OR11H4-202ENST00000641082 1585 ntAPPRIS P1 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 TLK1-206ENST00000434911 2156 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 CEP57-213ENST00000541150 2911 ntAPPRIS ALT2 TSL 5 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 TRIQK-204ENST00000517858 1882 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 TAS2R15P-201ENST00000390674 928 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 SUMO2P12-201ENST00000405924 140 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC083867.1-201ENST00000413567 457 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AL513477.1-202ENST00000417061 214 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 KRR1P1-201ENST00000419430 803 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC092660.1-201ENST00000420648 371 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC069157.1-201ENST00000421749 137 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC019097.1-201ENST00000424783 735 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC233728.2-201ENST00000425348 757 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 LINC01650-201ENST00000438093 602 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 RPL23AP7-203ENST00000449021 469 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 PRSS3P4-201ENST00000453323 162 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 UMAD1-204ENST00000482067 569 ntTSL 5 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 NCOR1P1-202ENST00000486162 291 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 RNA5SP320-201ENST00000516263 124 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC090092.1-201ENST00000530576 510 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 REXO2-218ENST00000544827 880 ntTSL 3 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 SERPINE4P-201ENST00000554978 281 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 CYCSP39-201ENST00000565821 309 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC144836.1-201ENST00000575911 340 ntTSL 2 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 MIR4325-201ENST00000583049 90 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 CERS6-AS1-202ENST00000594898 499 ntTSL 5 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC007619.2-201ENST00000605743 379 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC092954.1-201ENST00000609121 445 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 CERS6-AS1-209ENST00000609766 642 ntTSL 5 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC009090.3-201ENST00000616553 565 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 ZNF461-214ENST00000618437 774 ntTSL 5 BASIC1.55□□□□□ -2.16
LINC01549A6NIU2 AC104446.1-201ENST00000613728 1321 ntBASIC1.55□□□□□ -2.16
LINC01549A6NIU2 CENPCP1-201ENST00000533085 2578 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 SPAM1-201ENST00000223028 2007 ntAPPRIS ALT2 TSL 5 BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 PLS1-201ENST00000337777 3755 ntAPPRIS P1 TSL 1 (best) BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 RNU6-799P-201ENST00000363567 107 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 RNA5SP38-201ENST00000410750 119 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 AC097717.1-233ENST00000413557 460 ntTSL 3 BASIC1.54□□□□□ -2.16
LINC01549A6NIU2 AC007064.3-201ENST00000422608 359 ntBASIC1.54□□□□□ -2.16
LINC01549A6NIU2 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC1.54□□□□□ -2.16
Retrieved 100 of 98,524 protein–RNA pairs in 102.6 ms