Protein–RNA interactions for Protein: A5YKK6

CNOT1, CCR4-NOT transcription complex subunit 1, humanhuman

Known RBP Predictions only

Length 2,376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1A5YKK6 MTCO2P17-201ENST00000424336 677 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 TTTY16-201ENST00000437686 192 ntTSL 1 (best) BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 AL162388.1-201ENST00000450912 352 ntBASIC2.22□□□□□ -2.05
CNOT1A5YKK6 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 AC073591.1-201ENST00000552736 597 ntTSL 3 BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 LINC02328-203ENST00000557195 682 ntTSL 3 BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.22□□□□□ -2.05
CNOT1A5YKK6 FRG1BP-201ENST00000278882 761 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 MIR365B-201ENST00000362317 111 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 Y_RNA.224-201ENST00000364308 111 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 SPA17P1-201ENST00000416656 452 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 LINC01378-202ENST00000437514 783 ntTSL 3 BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 BMS1P7-201ENST00000602440 1052 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 IQCM-206ENST00000636793 1900 ntAPPRIS P5 TSL 5 BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 AL451074.5-201ENST00000415894 435 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 GYPE-202ENST00000437468 499 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 AC125238.1-201ENST00000448842 249 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 AC107398.1-201ENST00000486904 505 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 PDCL2P2-201ENST00000533651 189 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 PSMG2-204ENST00000585331 983 ntTSL 1 (best) BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 VN1R79P-201ENST00000593540 513 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 AP001521.1-201ENST00000609150 300 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 AL589994.2-201ENST00000621124 579 ntBASIC2.21□□□□□ -2.06
CNOT1A5YKK6 NDST3-201ENST00000296499 5961 ntAPPRIS P1 TSL 1 (best) BASIC2.21□□□□□ -2.06
CNOT1A5YKK6 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 RN7SKP44-201ENST00000363602 316 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 MIR1276-201ENST00000408707 83 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 AL591719.1-201ENST00000444669 744 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 RPL21P71-201ENST00000465598 459 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 AC110009.1-201ENST00000512965 451 ntTSL 5 BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 HMGB1P1-201ENST00000522557 636 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 AC008083.2-201ENST00000546707 476 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 AC096708.3-201ENST00000584226 559 ntTSL 2 BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 C5orf63-207ENST00000606937 607 ntTSL 2 BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 AC245517.5-201ENST00000611529 162 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 AP002967.1-201ENST00000624203 539 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 ARHGAP28-207ENST00000532996 1859 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 RNU4-62P-201ENST00000410125 130 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 LUZP4P1-201ENST00000415420 344 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 ATP5J2P3-201ENST00000451550 258 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 MSMB-201ENST00000581478 386 ntTSL 1 (best) BASIC2.2□□□□□ -2.06
CNOT1A5YKK6 MIR5007-201ENST00000583098 95 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 MIR6845-201ENST00000613182 61 ntBASIC2.2□□□□□ -2.06
CNOT1A5YKK6 MTND5P29-201ENST00000458676 1807 ntBASIC2.19□□□□□ -2.06
CNOT1A5YKK6 AC025125.1-201ENST00000624743 1922 ntBASIC2.19□□□□□ -2.06
CNOT1A5YKK6 Y_RNA.36-201ENST00000362602 112 ntBASIC2.19□□□□□ -2.06
CNOT1A5YKK6 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CNOT1A5YKK6 RNA5SP210-201ENST00000391034 120 ntBASIC2.19□□□□□ -2.06
CNOT1A5YKK6 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.19□□□□□ -2.06
CNOT1A5YKK6 AC011037.1-201ENST00000483964 558 ntBASIC2.19□□□□□ -2.06
CNOT1A5YKK6 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC2.19□□□□□ -2.06
CNOT1A5YKK6 C8orf59-209ENST00000612977 586 ntAPPRIS P1 TSL 2 BASIC2.19□□□□□ -2.06
CNOT1A5YKK6 FGF7-206ENST00000614567 3936 ntAPPRIS P1 TSL 1 (best) BASIC2.19□□□□□ -2.06
CNOT1A5YKK6 AC138915.3-201ENST00000562908 1389 ntBASIC2.19□□□□□ -2.06
CNOT1A5YKK6 POLR2J4-204ENST00000418424 324 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 RPS27P29-201ENST00000463110 252 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 VTRNA2-2P-201ENST00000516091 103 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AC003973.1-201ENST00000600071 546 ntTSL 4 BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AL139286.1-201ENST00000604465 483 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 RNU1-100P-201ENST00000365255 165 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 KLRC2-202ENST00000381902 1221 ntAPPRIS P2 TSL 1 (best) BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AL162578.1-201ENST00000406202 378 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 SNORA11.4-201ENST00000408823 129 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 PTP4A1P7-201ENST00000423476 514 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AC105402.2-201ENST00000438503 358 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AC010451.2-201ENST00000511514 545 ntTSL 4 BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 RAC1P5-201ENST00000512182 576 ntBASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AC092364.1-201ENST00000598561 471 ntTSL 3 BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 AJ009632.2-202ENST00000634644 1513 ntTSL 5 BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 SLCO1B3-201ENST00000261196 2840 ntAPPRIS P1 TSL 1 (best) BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 XPO4-202ENST00000400602 9884 ntAPPRIS ALT1 TSL 5 BASIC2.18□□□□□ -2.06
CNOT1A5YKK6 KCNIP4-IT1-201ENST00000627566 9848 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC2.17□□□□□ -2.06
CNOT1A5YKK6 AL512646.1-201ENST00000269395 1077 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-1-201ENST00000383898 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-42P-201ENST00000384165 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-36P-201ENST00000384172 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-4P-201ENST00000384205 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-5P-201ENST00000384238 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-3P-201ENST00000384314 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-2-201ENST00000384627 107 ntBASIC2.17□□□□□ -2.06
CNOT1A5YKK6 RNU6-9-201ENST00000384776 107 ntBASIC2.17□□□□□ -2.06
Retrieved 100 of 98,524 protein–RNA pairs in 103.7 ms