Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 LINS1-201ENST00000314742 4821 ntAPPRIS P1 TSL 5 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AC046195.1-201ENST00000518973 4171 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 LRRC69-201ENST00000343709 720 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 RNA5SP455-201ENST00000365190 119 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 RNU6-282P-201ENST00000365357 103 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 IGKV5-2-201ENST00000390244 408 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 PIGP-205ENST00000399103 656 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AL158834.2-201ENST00000415731 696 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 SNRPEP8-201ENST00000442866 260 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AC104651.2-201ENST00000447549 528 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 snoU13.8-201ENST00000458890 104 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 NPM1P41-201ENST00000512920 831 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AC114781.4-201ENST00000513707 639 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 RNU6-358P-201ENST00000516564 75 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 SNORA20.3-201ENST00000516880 132 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 RNU4ATAC10P-201ENST00000516967 122 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AP006289.1-201ENST00000538089 277 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AC024224.1-201ENST00000538284 609 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AL355097.1-201ENST00000555889 539 ntTSL 4 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AL049839.1-201ENST00000556151 657 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AC008752.3-201ENST00000588113 712 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 RPL12P25-202ENST00000598100 674 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AC008782.1-201ENST00000603386 430 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AL596245.1-201ENST00000618994 362 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AL022401.1-201ENST00000619498 108 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AC139792.3-201ENST00000623525 224 ntBASIC5.06□□□□□ -1.6
CCDC66A2RUB6 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 GLIPR1-201ENST00000266659 5877 ntAPPRIS P1 TSL 1 (best) BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.06□□□□□ -1.6
CCDC66A2RUB6 NCOA1-201ENST00000288599 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 CASC19-280ENST00000642102 1351 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 C1orf112-203ENST00000413811 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AP5M1-201ENST00000261558 11737 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 ABI3BP-201ENST00000284322 4498 ntAPPRIS P2 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 RNU5E-1-201ENST00000362477 120 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 Y_RNA.70-201ENST00000362886 110 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 U8.4-201ENST00000363626 134 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 Y_RNA.234-201ENST00000364409 97 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 RNU6-483P-201ENST00000384088 108 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 MIR765-201ENST00000390226 114 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AL645927.1-201ENST00000396783 406 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 BTBD10P2-201ENST00000404779 676 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 RPL31P2-201ENST00000413849 377 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AL033504.1-201ENST00000427015 773 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AP001117.1-201ENST00000428205 609 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 OR2B7P-201ENST00000429302 934 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 USP12PX-201ENST00000432383 1057 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 RHOT1P3-201ENST00000436571 331 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AL049734.2-201ENST00000441066 616 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 CEACAMP7-201ENST00000444105 496 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 RPL23AP20-201ENST00000447965 421 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 RPL7P52-201ENST00000449200 742 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC069549.1-201ENST00000451584 499 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AP001992.1-205ENST00000462248 379 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 RPS20P21-201ENST00000466859 343 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 RN7SL329P-201ENST00000467740 299 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC023194.1-201ENST00000493084 308 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC083795.2-201ENST00000510034 610 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC018437.2-201ENST00000517369 389 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC008694.2-201ENST00000517591 306 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 IFITM8P-201ENST00000522529 394 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 MTND1P35-201ENST00000526739 508 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 SNHG1-204ENST00000537068 629 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC092490.3-201ENST00000545370 572 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC107016.1-201ENST00000550463 337 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC055855.3-201ENST00000564269 578 ntTSL 2 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 OR1F2P-201ENST00000570470 933 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC015818.4-201ENST00000580931 353 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 MIR4691-201ENST00000583764 85 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AL121932.1-201ENST00000605542 214 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 PRKCQ-AS1-207ENST00000607996 531 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 ADPRM-204ENST00000609540 1138 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AL020991.1-201ENST00000612314 373 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 AC091953.2-201ENST00000623979 160 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 CR381572.2-201ENST00000624852 397 ntBASIC5.05□□□□□ -1.6
CCDC66A2RUB6 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC5.05□□□□□ -1.6
CCDC66A2RUB6 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC66A2RUB6 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CCDC66A2RUB6 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.04□□□□□ -1.6
CCDC66A2RUB6 ZCCHC7-202ENST00000336755 2619 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CCDC66A2RUB6 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
Retrieved 100 of 98,524 protein–RNA pairs in 128.4 ms