Protein–RNA interactions for Protein: A2IDD5

CCDC78, Coiled-coil domain-containing protein 78, humanhuman

Predictions only

Length 438 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78A2IDD5 CENPI-202ENST00000372927 3262 ntAPPRIS P3 TSL 5 BASIC4.56□□□□□ -1.68
CCDC78A2IDD5 EOGT-210ENST00000615922 1931 ntBASIC4.56□□□□□ -1.68
CCDC78A2IDD5 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC78A2IDD5 PARP8-201ENST00000281631 7177 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC78A2IDD5 ZNF705D-202ENST00000400085 3377 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
CCDC78A2IDD5 NABP1-205ENST00000425611 1878 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC78A2IDD5 DMD-230ENST00000620040 13746 ntAPPRIS ALT2 TSL 5 BASIC4.56□□□□□ -1.68
CCDC78A2IDD5 AC011978.2-201ENST00000569835 2054 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 ELL2P4-201ENST00000446870 1376 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 ITCH-207ENST00000535650 2940 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC139769.1-204ENST00000472297 1931 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 OR5AK2-201ENST00000326855 996 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 SNORA72.1-201ENST00000363485 129 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 RNU6-777P-201ENST00000364265 104 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 NFIB-202ENST00000380924 840 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 RNU6-952P-201ENST00000391164 108 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 CCNG1P1-201ENST00000406783 885 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 RNU4-55P-201ENST00000410731 137 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 RNU2-41P-201ENST00000410991 178 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 RAB28P1-201ENST00000411517 641 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 SPA17P1-201ENST00000416656 452 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC119751.6-201ENST00000416712 186 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC005482.1-201ENST00000420758 575 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 MTCO2P5-201ENST00000422621 426 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AL355674.1-201ENST00000423681 648 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AL355314.2-201ENST00000427182 436 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC016712.1-201ENST00000431088 378 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 USP12PX-201ENST00000432383 1057 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 CBX1P1-201ENST00000440184 427 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 RPS4XP4-201ENST00000443195 763 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 RGS5-217ENST00000451759 835 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AL513533.1-201ENST00000453728 415 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 MTCO1P42-201ENST00000457379 726 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC073218.1-201ENST00000458413 171 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 LINC01206-205ENST00000490001 949 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC034222.1-201ENST00000494052 532 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC005726.1-201ENST00000494679 427 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC079467.1-201ENST00000508512 503 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC009646.1-201ENST00000510455 318 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC034159.1-201ENST00000513885 583 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC016065.2-201ENST00000514530 444 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 RN7SKP234-201ENST00000517173 224 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC134698.5-201ENST00000519444 336 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 CARD16-203ENST00000525374 503 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 ZNF84-205ENST00000535439 647 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC079070.1-201ENST00000578740 555 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC090844.2-203ENST00000582263 632 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 CKS1BP3-201ENST00000600888 237 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 RPL23AP92-201ENST00000603609 255 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AP000907.4-201ENST00000604143 237 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AL160290.3-201ENST00000604869 165 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC008536.2-201ENST00000607284 349 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 MLECP1-201ENST00000615893 709 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC099669.2-201ENST00000616549 437 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC092683.2-201ENST00000619740 621 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC067931.1-201ENST00000624190 671 ntBASIC4.55□□□□□ -1.68
CCDC78A2IDD5 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 DLD-204ENST00000437604 1859 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 AC004803.1-201ENST00000503602 3207 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC78A2IDD5 FANCI-202ENST00000310775 4743 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 PIKFYVE-201ENST00000264380 9901 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 PKIB-201ENST00000258014 1595 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 AC009951.1-201ENST00000623674 2614 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 ORC4-216ENST00000540442 6472 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 CACNB4-257ENST00000637547 7658 ntTSL 5 BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 U8.3-201ENST00000363321 132 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 Y_RNA.481-201ENST00000384373 102 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 TRAV12-2-201ENST00000390437 445 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 ENSAP1-201ENST00000392855 326 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 HDGFP1-201ENST00000405943 252 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 RWDD4P2-201ENST00000426392 563 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 AC092017.2-201ENST00000427600 362 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 AC091390.1-201ENST00000433904 331 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 RPL22P17-201ENST00000438729 315 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 AL662791.1-201ENST00000441992 928 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 NFU1P2-201ENST00000448700 469 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.54□□□□□ -1.68
CCDC78A2IDD5 RPS27AP17-201ENST00000463344 455 ntBASIC4.54□□□□□ -1.68
CCDC78A2IDD5 AC092989.1-201ENST00000481235 277 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms