Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC092447.10-201ENST00000620607 1652 ntBASIC4.03□□□□□ -1.76
TCRBV7S3A2A0A539 ATL2-202ENST00000402054 1883 ntTSL 5 BASIC4.03□□□□□ -1.77
TCRBV7S3A2A0A539 API5-210ENST00000534600 1760 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 MSTN-201ENST00000260950 2822 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 LINC02232-201ENST00000509932 4079 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AL161781.1-201ENST00000354277 403 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 RNA5SP322-201ENST00000363617 119 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 RNU1-32P-201ENST00000363937 159 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 RNU1-89P-201ENST00000384592 164 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 SNORD115.1-201ENST00000391109 76 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 U3.29-201ENST00000391296 212 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 OR6C69P-201ENST00000394268 893 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 RPS4XP9-201ENST00000405151 780 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 Y_RNA.598-201ENST00000410480 95 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 HMGN1P14-201ENST00000412459 517 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AL356583.2-201ENST00000426536 280 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 DNAJC19P7-201ENST00000428811 344 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 OR51AB1P-201ENST00000429046 620 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 PCYT1B-AS1-201ENST00000432626 275 ntTSL 2 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 ATP5HP2-201ENST00000433885 485 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 SDCBPP1-201ENST00000440192 890 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AL031667.1-201ENST00000440222 725 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 RPL7P36-201ENST00000444633 681 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 DNM3-IT1-201ENST00000450800 396 ntTSL 3 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 SBDSP1-204ENST00000453858 737 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 TPT1P7-201ENST00000458300 517 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 RPL23AP2-201ENST00000471227 466 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 CDC42P4-201ENST00000510507 563 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC008780.1-201ENST00000513392 409 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC005798.1-201ENST00000513715 387 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 RNA5SP143-201ENST00000516936 115 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 RNU6-1003P-201ENST00000517099 105 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 PAICSP4-201ENST00000517543 1253 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC087341.1-201ENST00000521490 491 ntTSL 2 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AP003730.1-201ENST00000524605 285 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC022878.1-201ENST00000530684 149 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AL139174.1-201ENST00000531489 886 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 DERA-209ENST00000532964 854 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AL136146.2-201ENST00000534594 494 ntTSL 2 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 TIMM9-208ENST00000556007 746 ntTSL 3 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 EIF1P4-201ENST00000572664 335 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC005899.4-201ENST00000581915 514 ntTSL 4 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC090409.2-202ENST00000585706 604 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 IPO5P1-202ENST00000600039 287 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC025165.5-201ENST00000602802 578 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AL355812.1-201ENST00000603215 216 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 NDUFA8P1-201ENST00000605525 367 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC138749.5-201ENST00000611461 208 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 MIR486-1-201ENST00000612171 68 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 Z99129.1-201ENST00000612510 255 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC008121.2-201ENST00000614647 523 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AC116165.2-201ENST00000616705 206 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 GPR18-202ENST00000397470 1468 ntAPPRIS P1 TSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 FAM91A3P-201ENST00000456826 2544 ntBASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 SCFD1-207ENST00000544052 2058 ntTSL 2 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 MTRNR2L6-201ENST00000604952 1447 ntAPPRIS P1 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC4.02□□□□□ -1.77
TCRBV7S3A2A0A539 ZNF345-214ENST00000612719 2938 ntAPPRIS P1 TSL 4 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 RNU6-339P-201ENST00000384310 107 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC136624.1-201ENST00000400791 413 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AL133343.3-201ENST00000413983 469 ntTSL 2 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC245028.1-201ENST00000423259 256 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AL929288.1-201ENST00000426262 746 ntTSL 3 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 PSMA2P3-201ENST00000429685 675 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AL122017.1-201ENST00000435858 784 ntTSL 2 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 RANP8-201ENST00000444720 713 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 NUTM2A-AS1-209ENST00000447424 571 ntTSL 3 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 TPT1P13-201ENST00000449760 499 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 USP9YP12-201ENST00000450481 570 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 RN7SL860P-201ENST00000473738 223 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 LARP1BP2-201ENST00000486594 519 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC034222.1-201ENST00000494052 532 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 PDLIM1P4-201ENST00000504327 1006 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC109464.2-201ENST00000510242 943 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 TMEM248P1-201ENST00000510579 951 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC108064.1-201ENST00000513791 460 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 SLIT2-IT1-201ENST00000515882 601 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 IGKV2D-36-201ENST00000518643 226 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC087369.1-201ENST00000520775 996 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC009643.1-201ENST00000532030 391 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 RRAS2-210ENST00000534746 993 ntTSL 2 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 YPEL5P3-201ENST00000547227 352 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AC107016.1-201ENST00000550463 337 ntBASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 AL359233.1-201ENST00000554029 364 ntTSL 3 BASIC4.01□□□□□ -1.77
TCRBV7S3A2A0A539 CENPUP2-201ENST00000555897 1186 ntBASIC4.01□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 129.4 ms