| BACE2 | Q9Y5Z0 | AL645608.4-201 | ENST00000423619 | 154 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RPS26P47-201 | ENST00000427219 | 348 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | LANCL1-AS1-203 | ENST00000433296 | 864 nt | TSL 2 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC003991.1-205 | ENST00000447758 | 625 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC104308.1-201 | ENST00000454621 | 333 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RN7SL354P-201 | ENST00000469282 | 294 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL049874.2-201 | ENST00000492636 | 288 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RN7SKP92-201 | ENST00000517266 | 244 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC105029.1-201 | ENST00000520250 | 669 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC010175.1-201 | ENST00000538219 | 224 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL110118.1-201 | ENST00000553543 | 400 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | SETP2-201 | ENST00000553886 | 926 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL121821.1-201 | ENST00000557067 | 530 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC091073.1-201 | ENST00000559620 | 666 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC009754.1-201 | ENST00000566282 | 540 nt | TSL 4 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | MIR5699-201 | ENST00000578903 | 90 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | SNORA74C-1-201 | ENST00000580726 | 201 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AP001011.1-202 | ENST00000581172 | 667 nt | TSL 3 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | MIR4660-201 | ENST00000583549 | 74 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AP005380.1-201 | ENST00000584896 | 547 nt | TSL 4 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | YWHAQP7-201 | ENST00000603536 | 658 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | LAMTOR5-AS1-217 | ENST00000608152 | 407 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC105429.2-201 | ENST00000610567 | 517 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RNF123-214 | ENST00000629802 | 207 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | WISP3-211 | ENST00000639360 | 1026 nt | TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | ARHGAP18-201 | ENST00000368149 | 4462 nt | APPRIS P1 TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | CKAP5-202 | ENST00000354558 | 6428 nt | TSL 1 (best) BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | OR2L3-202 | ENST00000641161 | 2830 nt | APPRIS P1 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | OR2L3-203 | ENST00000641649 | 2846 nt | APPRIS P1 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | ATP8A2P2-201 | ENST00000437678 | 1568 nt | BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | MROH9-202 | ENST00000367759 | 3165 nt | APPRIS ALT2 TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | NLRP11-202 | ENST00000589824 | 3231 nt | APPRIS ALT2 TSL 5 BASIC | 5.12 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | PTPRC-209 | ENST00000442510 | 5164 nt | APPRIS P4 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC006020.1-201 | ENST00000420179 | 1854 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | CLUL1-213 | ENST00000620089 | 1947 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC011978.2-201 | ENST00000569835 | 2054 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | OR8A1-203 | ENST00000641670 | 5709 nt | APPRIS P1 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL590240.1-201 | ENST00000334118 | 313 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | SYF2-202 | ENST00000354361 | 926 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | SNORA63-201 | ENST00000363450 | 132 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RNU1-130P-201 | ENST00000363930 | 160 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RNU6-74P-201 | ENST00000384235 | 107 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL136116.1-201 | ENST00000403591 | 381 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL049697.2-201 | ENST00000403708 | 294 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RN7SKP106-201 | ENST00000410832 | 272 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL162394.1-201 | ENST00000413271 | 419 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL109924.3-201 | ENST00000413324 | 393 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC004987.3-201 | ENST00000413879 | 771 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RPL35AP12-201 | ENST00000425362 | 338 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL161618.1-201 | ENST00000438738 | 761 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | LINC01034-201 | ENST00000448806 | 277 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | FO393401.1-201 | ENST00000453914 | 600 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL445524.1-204 | ENST00000454631 | 458 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AP001439.1-201 | ENST00000455275 | 392 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL133351.1-201 | ENST00000456189 | 417 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | snoU13.1-201 | ENST00000459157 | 104 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC078785.3-201 | ENST00000476607 | 425 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC073073.1-201 | ENST00000493920 | 463 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RN7SL558P-201 | ENST00000497468 | 299 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | EIF4EP3-201 | ENST00000498782 | 656 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | RNU1-6P-201 | ENST00000516290 | 144 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC083923.2-203 | ENST00000520512 | 372 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC084083.1-201 | ENST00000526947 | 722 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC044810.3-201 | ENST00000527565 | 589 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | HPRT1P3-201 | ENST00000539521 | 576 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC023050.3-201 | ENST00000541142 | 333 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC092470.1-201 | ENST00000546187 | 132 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC008083.3-202 | ENST00000552063 | 277 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL442663.2-201 | ENST00000554385 | 511 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL359219.2-201 | ENST00000555184 | 348 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | LINC02328-203 | ENST00000557195 | 682 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC025043.1-201 | ENST00000558047 | 625 nt | TSL 2 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | PWRN1-202 | ENST00000562501 | 642 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC124068.1-201 | ENST00000563131 | 678 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | FOPNL-205 | ENST00000573429 | 646 nt | TSL 3 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC005498.1-201 | ENST00000592125 | 465 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC243960.4-201 | ENST00000600532 | 288 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | KC877982.1-201 | ENST00000602313 | 470 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | ACYP2-208 | ENST00000606865 | 674 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | OR6R2P-201 | ENST00000609216 | 300 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | uc_338.12-201 | ENST00000616344 | 181 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL122125.1-201 | ENST00000616999 | 600 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC073869.10-201 | ENST00000642016 | 354 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL122126.1-201 | ENST00000546905 | 1318 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | DICER1-212 | ENST00000541352 | 5621 nt | TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | SAMMSON-213 | ENST00000641336 | 1521 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | HUWE1-214 | ENST00000612484 | 14311 nt | TSL 5 BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC002525.1-201 | ENST00000624392 | 1622 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | LINC01111-201 | ENST00000518732 | 1663 nt | TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AL451142.2-201 | ENST00000429076 | 2090 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AMY2B-201 | ENST00000361355 | 2181 nt | APPRIS P1 TSL 1 (best) BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | AC009902.3-201 | ENST00000606235 | 2172 nt | BASIC | 5.11 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | PPEF1-201 | ENST00000349874 | 2687 nt | TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | CDK15-204 | ENST00000450471 | 3659 nt | APPRIS ALT1 TSL 1 (best) BASIC | 5.1 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | OR10K1-203 | ENST00000641432 | 3775 nt | APPRIS P1 BASIC | 5.1 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | PRG4-206 | ENST00000635041 | 4915 nt | APPRIS ALT2 TSL 5 BASIC | 5.1 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | LCMT1-AS2-202 | ENST00000565214 | 5666 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | CCDC169-204 | ENST00000379864 | 5944 nt | TSL 1 (best) BASIC | 5.1 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.58-201 | ENST00000362807 | 102 nt | BASIC | 5.1 | □□□□□ -1.59 | | |
| BACE2 | Q9Y5Z0 | Y_RNA.154-201 | ENST00000363624 | 102 nt | BASIC | 5.1 | □□□□□ -1.59 | | |