Protein–RNA interactions for Protein: Q9Y5Y9

SCN10A, Sodium channel protein type 10 subunit alpha, humanhuman

Predictions only

Length 1,956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN10AQ9Y5Y9 GTF2H2B-203ENST00000508065 1432 ntBASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 SLITRK6-201ENST00000400286 4318 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 PSG1-205ENST00000595124 1692 ntTSL 2 BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 UGT2B10-201ENST00000265403 1931 ntAPPRIS P1 TSL 1 (best) BASIC2.75□□□□□ -1.97
SCN10AQ9Y5Y9 HERC5-203ENST00000508159 2243 ntTSL 2 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AIMP1P1-201ENST00000418670 937 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 DPH3P2-201ENST00000422618 250 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AL157827.1-201ENST00000447622 132 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 HMGN1P5-201ENST00000448591 263 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AP000893.1-201ENST00000474462 794 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AC234781.5-201ENST00000508429 271 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 CPSF6-207ENST00000551516 234 ntTSL 2 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AL354950.1-201ENST00000614150 568 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AC022031.1-201ENST00000585985 2593 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 ARID2-206ENST00000457135 4356 ntTSL 1 (best) BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 GYPA-201ENST00000324022 751 ntAPPRIS ALT2 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 RPL9P7-201ENST00000330965 580 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 FAM133CP-201ENST00000332869 704 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 RNU4-26P-201ENST00000410270 107 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AL392003.1-201ENST00000434394 243 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 RPL23AP45-201ENST00000476406 468 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 RPL30P11-201ENST00000495304 339 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 UCHL1-AS1-201ENST00000507190 592 ntTSL 4 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 MEPE-206ENST00000511670 550 ntTSL 4 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 PANCR-202ENST00000513690 448 ntTSL 2 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 RPL23AP84-201ENST00000571193 464 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 MTCO2P22-201ENST00000603246 681 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AL391834.1-201ENST00000609609 560 ntBASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 AC008162.2-201ENST00000613352 291 ntAPPRIS P1 TSL 3 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 LINC01376-202ENST00000424895 1949 ntTSL 2 BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC2.74□□□□□ -1.97
SCN10AQ9Y5Y9 DPP10-205ENST00000410059 6278 ntAPPRIS ALT2 TSL 1 (best) BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AL021368.2-201ENST00000606125 5352 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 RFX3-203ENST00000381984 364 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 MIR504-201ENST00000385065 83 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 MIR181B1-201ENST00000385240 110 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 EIF5P1-201ENST00000400019 1231 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AL355388.1-201ENST00000415726 401 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 ELOCP11-201ENST00000436690 332 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 RPL23AP74-201ENST00000437246 471 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 RPS7P5-201ENST00000441482 581 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 FAM103A2P-201ENST00000444122 354 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 ELOCP16-201ENST00000444494 332 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 ARL5AP2-201ENST00000444698 533 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 THAP6-203ENST00000502620 582 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AC099520.1-202ENST00000503650 777 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AC074131.1-201ENST00000514662 253 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 RNU2-58P-201ENST00000516403 183 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AC023866.1-201ENST00000518064 579 ntTSL 4 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AC025434.1-201ENST00000520705 460 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AF117829.1-209ENST00000523995 767 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 MIR3186-201ENST00000577404 85 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AC135012.2-201ENST00000600234 479 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 AC002546.1-201ENST00000588041 2504 ntBASIC2.73□□□□□ -1.97
SCN10AQ9Y5Y9 RNU2-71P-201ENST00000411395 189 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AL356806.1-201ENST00000422524 916 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AL109761.1-201ENST00000428689 422 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 TRIM60P3Y-201ENST00000432201 673 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC005772.1-201ENST00000446671 976 ntTSL 1 (best) BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 FO393415.3-201ENST00000456424 375 ntTSL 3 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 RPL23AP14-201ENST00000468281 468 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC128657.1-201ENST00000549459 145 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC021739.4-201ENST00000561417 569 ntTSL 4 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC055764.2-201ENST00000610089 670 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 ABCC9-206ENST00000621589 450 ntTSL 5 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC138649.5-201ENST00000637456 137 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 CCDC66-201ENST00000326595 3027 ntAPPRIS P3 TSL 1 (best) BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 OR5V1-217ENST00000641768 2763 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 OGN-201ENST00000262551 2971 ntAPPRIS P1 TSL 5 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 RPL26P37-201ENST00000411983 438 ntBASIC2.72□□□□□ -1.97
SCN10AQ9Y5Y9 RPS20P25-201ENST00000412447 352 ntBASIC2.72□□□□□ -1.97
Retrieved 100 of 98,524 protein–RNA pairs in 107.7 ms