Protein–RNA interactions for Protein: Q9Y5H8

PCDHA3, Protocadherin alpha-3, humanhuman

Predictions only

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3Q9Y5H8 LCOR-204ENST00000371103 10342 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 LINC02493-201ENST00000509964 1704 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 OR5V1-215ENST00000377154 1266 ntAPPRIS P1 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 LINC01423-201ENST00000414189 608 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 SNRPFP1-201ENST00000414761 252 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC127526.1-201ENST00000417526 366 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC083900.1-201ENST00000421964 469 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 RBMY1KP-201ENST00000423480 476 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 ISCA1P1-201ENST00000426679 387 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC007003.1-202ENST00000439318 349 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AL139275.2-201ENST00000444731 539 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AL354754.1-201ENST00000449730 625 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AL353691.1-201ENST00000451332 387 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 OFD1P4Y-201ENST00000455273 1179 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 RPS4XP10-201ENST00000465034 731 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC079943.2-201ENST00000488999 716 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 RPL9P6-201ENST00000492764 598 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 RN7SL812P-201ENST00000493791 279 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 KCTD9P5-201ENST00000504141 1170 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC034226.1-201ENST00000506429 487 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 RNA5SP154-201ENST00000516193 111 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 MYL12AP1-201ENST00000518490 515 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 DEFB108A-201ENST00000530110 222 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 STX3-204ENST00000530221 534 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 OR8L1P-201ENST00000534005 955 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 UNC13C-202ENST00000539562 938 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC010183.2-202ENST00000546791 382 ntTSL 3 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC009135.1-201ENST00000549303 776 ntTSL 2 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC087883.1-201ENST00000551882 391 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 TPRKBP2-201ENST00000565969 475 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 MIR4801-201ENST00000582704 82 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC115621.1-201ENST00000604653 858 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC004853.1-201ENST00000604902 698 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC126118.1-201ENST00000607744 628 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 STARD13-AS-239ENST00000609588 982 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC138649.3-201ENST00000622154 254 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 FAM91A3P-201ENST00000456826 2544 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 TAX1BP1-202ENST00000396319 2892 ntAPPRIS P3 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC011266.1-201ENST00000624119 3569 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 AC092125.1-201ENST00000562568 1995 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 PLCB1-233ENST00000637919 5074 ntTSL 5 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 ZNF442-205ENST00000545749 1884 ntAPPRIS P1 TSL 5 BASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 MTND5P33-201ENST00000571250 1450 ntBASIC4.56□□□□□ -1.68
PCDHA3Q9Y5H8 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 ZMYND11-209ENST00000402736 3950 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 MPDZ-211ENST00000536827 6176 ntAPPRIS ALT2 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 ZRANB3-201ENST00000264159 4046 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 OR5K1-201ENST00000332650 1097 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 RNU6-97P-201ENST00000363387 104 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 TMLHE-202ENST00000369439 1248 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 SNORD51-201ENST00000384320 80 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 MT-TC-201ENST00000387405 66 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC078974.1-201ENST00000411597 223 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 RPL7AP25-201ENST00000423357 805 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 LINC01492-202ENST00000425157 659 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AL589872.1-201ENST00000426602 288 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 LINC02541-201ENST00000427157 327 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 ARPP21-211ENST00000427542 568 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AL360081.1-201ENST00000428299 555 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 DHFRP3-201ENST00000455595 559 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 snoU109.4-201ENST00000458953 143 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 RPL35AP15-201ENST00000468042 339 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 RPS3AP17-201ENST00000472594 777 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 MTND1P3-201ENST00000484956 952 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 RPL23AP72-201ENST00000492447 435 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC138057.1-201ENST00000497258 696 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC008629.1-202ENST00000504820 525 ntTSL 4 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC109927.2-201ENST00000506416 303 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 Y_RNA.672-201ENST00000516289 104 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC022695.3-201ENST00000523385 478 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 MED28P5-201ENST00000528254 438 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 HNRNPCP4-201ENST00000571636 900 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 LINC02185-201ENST00000575424 760 ntTSL 5 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC069061.3-201ENST00000582254 823 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 DUXAP4-201ENST00000603046 613 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AL365503.1-201ENST00000605247 905 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 C2orf91-203ENST00000615044 393 ntAPPRIS ALT2 TSL 5 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 AC091925.2-201ENST00000625059 256 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 KIFAP3-202ENST00000367765 4111 ntTSL 2 BASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 MTCO1P24-201ENST00000515438 1558 ntBASIC4.55□□□□□ -1.68
PCDHA3Q9Y5H8 TBC1D31-210ENST00000521676 3256 ntTSL 5 BASIC4.55□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 105.4 ms