Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 AP3B1-204ENST00000519295 3986 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 LGALS13-201ENST00000221797 602 ntAPPRIS P2 TSL 1 (best) BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 OR5P1P-201ENST00000299512 925 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 QKI-202ENST00000361195 1063 ntTSL 1 (best) BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 Y_RNA.146-201ENST00000363549 102 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 Y_RNA.231-201ENST00000364358 102 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 RNU6-831P-201ENST00000384548 107 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 TRAV26-1-201ENST00000390455 537 ntAPPRIS P1 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 SNORA48.4-201ENST00000391089 134 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AC016769.3-201ENST00000396562 315 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AL023807.1-201ENST00000407932 359 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 RNA5SP345-201ENST00000410646 108 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 Y_RNA.615-201ENST00000410769 117 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 Z82205.1-201ENST00000428456 297 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 ERLEC1P1-201ENST00000433806 578 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 MED28P3-201ENST00000444288 531 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 MYCBP2-AS1-202ENST00000448470 333 ntTSL 3 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AC073415.1-201ENST00000449240 153 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 MTND3P16-201ENST00000452205 344 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AC123023.1-201ENST00000455974 555 ntTSL 4 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AC005229.2-201ENST00000456995 399 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 NIP7P2-201ENST00000485801 544 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 TXNP6-201ENST00000510190 310 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AC026402.1-201ENST00000513642 170 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AC091944.1-201ENST00000521984 449 ntTSL 3 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 AC008703.1-201ENST00000637629 1174 ntTSL 5 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 OR56B2P-202ENST00000641377 2453 ntBASIC6.17□□□□□ -1.42
RTCBQ9Y3I0 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AC107081.3-201ENST00000612715 2034 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 CENPI-201ENST00000372926 2375 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 LYST-202ENST00000389794 12985 ntTSL 5 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 A2MP1-204ENST00000566278 4130 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 Y_RNA.100-201ENST00000363141 102 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 RNA5SP515-201ENST00000364570 118 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 RNU6-1297P-201ENST00000384415 104 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 SNORD37.1-201ENST00000390968 65 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 TTTY17A-201ENST00000416110 166 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 TTTY17C-201ENST00000421387 166 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 HSPE1P1-201ENST00000421494 318 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 TTTY17B-201ENST00000441906 166 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AL162591.2-201ENST00000449634 317 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AL691482.1-201ENST00000453255 87 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 GMFBP1-201ENST00000467831 427 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 MTND4P17-201ENST00000470444 350 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AC093815.1-201ENST00000508637 280 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 RNU6-559P-201ENST00000516151 98 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 TRAPPC2-208ENST00000519885 561 ntTSL 3 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AC009597.1-201ENST00000521215 584 ntTSL 4 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AC090531.1-202ENST00000548450 499 ntTSL 3 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AC016925.2-201ENST00000605108 242 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 SOX2-OT-255ENST00000630150 649 ntTSL 5 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 LTA4H-202ENST00000413268 1908 ntTSL 2 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 ERVFRD-3-201ENST00000578561 1617 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 ASNSP3-201ENST00000451989 1306 ntBASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 PIGK-203ENST00000445065 4318 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
RTCBQ9Y3I0 LCMT1-AS2-202ENST00000565214 5666 ntBASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 BMPR1APS1-201ENST00000403332 1598 ntBASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 PNPLA4-203ENST00000444736 2752 ntAPPRIS P1 TSL 4 BASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 RNA5SP388-201ENST00000362584 119 ntBASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 OR1L6-202ENST00000373684 1044 ntBASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 AL356421.1-201ENST00000403255 413 ntBASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 REREP1Y-201ENST00000422655 198 ntBASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 RPL39L-202ENST00000433055 749 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 AC138761.5-201ENST00000433967 325 ntBASIC6.15□□□□□ -1.42
RTCBQ9Y3I0 YWHAZP8-201ENST00000436935 731 ntBASIC6.15□□□□□ -1.42
Retrieved 100 of 98,524 protein–RNA pairs in 99.3 ms