Protein–RNA interactions for Protein: Q9Y3E7

CHMP3, Charged multivesicular body protein 3, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3Q9Y3E7 COX6B1P1-201ENST00000415962 213 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC096632.1-201ENST00000427395 310 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 ZFY-AS1-202ENST00000431145 419 ntTSL 3 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 HMGB3P11-201ENST00000440127 604 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AL353780.1-201ENST00000455583 458 ntTSL 2 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC012181.1-201ENST00000479895 423 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 RN7SL319P-201ENST00000480656 221 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC008592.2-201ENST00000506070 571 ntTSL 3 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 HMGB3P15-201ENST00000507326 574 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 FAM206BP-201ENST00000510179 541 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 TXNP6-201ENST00000510190 310 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 SNORD27.1-201ENST00000516319 72 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 MIR4700-201ENST00000578311 74 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC067968.2-201ENST00000592583 566 ntTSL 4 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 AL713922.2-201ENST00000619384 716 ntBASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 ADAM29-203ENST00000445694 3244 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC6.32□□□□□ -1.4
CHMP3Q9Y3E7 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AC007823.1-201ENST00000569932 1566 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 MAK-203ENST00000474039 3859 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 OR6C2-203ENST00000641516 1682 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AC011155.1-201ENST00000316512 456 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 C5orf46-201ENST00000318315 506 ntAPPRIS P2 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 RNU6-1309P-201ENST00000363305 108 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 Y_RNA.301-201ENST00000364990 103 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 RNU4-48P-201ENST00000365559 182 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 DEFB110-201ENST00000371148 384 ntAPPRIS P3 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AL358176.2-201ENST00000425769 204 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 VTI1BP4-201ENST00000427516 527 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 RPL7L1P10-201ENST00000427790 463 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 RPS20P5-201ENST00000434808 360 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AC112498.1-201ENST00000444401 332 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 IGHV5-78-201ENST00000450948 295 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 LINC01645-201ENST00000451341 491 ntTSL 3 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AP000893.1-201ENST00000474462 794 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 RPS27AP18-201ENST00000515536 459 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 RNU6-347P-201ENST00000516658 105 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 MYL12AP1-201ENST00000518490 515 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 OR5B10P-201ENST00000532869 642 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 LSM6P2-201ENST00000552208 177 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AL163153.1-201ENST00000554223 283 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AC006006.1-201ENST00000603082 144 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 AL078596.1-201ENST00000624856 447 ntBASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 FAM69A-202ENST00000613047 2646 ntTSL 4 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 LINC01541-202ENST00000568095 3105 ntTSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 YPEL5-204ENST00000402003 2197 ntAPPRIS P1 TSL 2 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.31□□□□□ -1.4
CHMP3Q9Y3E7 MTUS1-202ENST00000297488 3731 ntAPPRIS ALT1 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC063976.2-201ENST00000425667 3556 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 Y_RNA.22-201ENST00000362492 102 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 RNU4-66P-201ENST00000365199 138 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 RNU6-639P-201ENST00000384074 107 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 RNU6-38P-201ENST00000384085 107 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 SNORA70.10-201ENST00000384515 134 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AL035079.1-201ENST00000405210 287 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 RNA5SP345-201ENST00000410646 108 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 RN7SKP235-201ENST00000410662 305 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AL360081.1-201ENST00000428299 555 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC108059.2-201ENST00000434626 151 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AL354714.3-201ENST00000447284 493 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 NANOGP10-201ENST00000453325 895 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 RNU6-333P-201ENST00000459117 107 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC068587.1-201ENST00000483613 781 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 COX6B1P2-201ENST00000489624 230 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 RPL23AP72-201ENST00000492447 435 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 COPS8P3-201ENST00000526024 482 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC021006.3-201ENST00000530771 192 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 OR5BN1P-201ENST00000532955 829 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC008033.2-201ENST00000542626 177 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 LINC02464-201ENST00000552060 368 ntTSL 2 BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC103739.1-201ENST00000558389 474 ntTSL 3 BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 MIR4675-201ENST00000577898 77 ntBASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 LINC02210-208ENST00000585118 546 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC6.3□□□□□ -1.4
CHMP3Q9Y3E7 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC6.3□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms